Alternatives and similar repositories for GFAP:

Users that are interested in GFAP are comparing it to the libraries listed below

• sc-zhang / AlleleFinder
  AlleleFinder is a tool for identifying allele genes from polyploid genome.
  ☆27Updated 3 months ago
• linyuiz / zgtools
  zgtools: A pipeline that allows for the convenient acquisition of T2T (Telomere-to-Telomere) genomes.
  ☆29Updated 2 months ago
• wangyibin / CPhasing
  C-Phasing/CPhasing: Phasing and scaffolding polyploid genomes based on Pore-C, HiFi-C/CiFi or Hi-C.
  ☆31Updated last week
• molevol-ub / bitacora
  BITACORA: A Bioinformatics tool for gene family annotation
  ☆43Updated 11 months ago
• zhouyflab / PN40024_T2T_Genome
  The complete reference genome for grapevine (Vitis vinifera L.) genetics and breeding
  ☆14Updated last month
• Immortal2333 / Telomeres_and_Centromeres
  This is a method to find telomeres and centromeres in plants.
  ☆40Updated last year
• phasegenomics / juicebox_scripts
  A collection of scripts for working with Hi-C data, Juicebox, and other genomic file formats
  ☆65Updated 3 years ago
• baozg / assembly-annotation-pipeline
  Plant genome assembly and annotation pipeline using snakemake
  ☆42Updated last year
• JiaoLab2021 / EVG
  A rapid and accurate ensemble pipeline for graph-based variant genotyping with lower depth of short reads
  ☆37Updated 9 months ago
• chenym1 / genetribe
  A tool for performing collinearity-incorporating homology inference
  ☆29Updated last year
• yanyew / SynGAP
  ☆32Updated 4 months ago
• qiao-xin / Scripts_for_GB
  The code used in the manuscript titled "Gene duplication and evolution in recurring polyploidization-diploidization cycles in plants".
  ☆28Updated 4 years ago
• SwiftSeal / resistify
  Resistify is a program which rapidly identifies and classifies plant resistance genes from protein sequences. It is designed to be lightw…
  ☆31Updated 2 weeks ago
• hewm2008 / RectChr
  Multi-level visualization of genomic statistical variables on rectangular chromosomes
  ☆38Updated 4 months ago
• baozg / phased-assembly-check
  ☆29Updated 3 months ago
• simon19891216 / CentIER
  ☆29Updated 7 months ago
• wjian8 / psvcp_v1.01
  Pan-genome Construction and Population Structure Variation Calling pipeline
  ☆38Updated 6 months ago
• JM-SONG / GenomeSyn
  ☆25Updated 3 years ago
• lurebgi / chicken-T2T
  Scripts that used in our chicken T2T manuscript.
  ☆19Updated last year
• amsession / Kmer-based-Subgenome-Mapping
  ☆20Updated 8 months ago
• xjtu-omics / HiCAT
  HiCAT new project
  ☆27Updated last year
• Jwindler / AutoHiC
  A novel genome assembly pipeline based on deep learning
  ☆62Updated 4 months ago
• yilinZhang-bio / Watermelon-pangenome
  ☆21Updated last year
• JiaoLab2021 / varigraph
  An accurate and widely applicable pangenome graph-based variant genotyper for diploid and polyploid genomes
  ☆24Updated last month
• lardo / khaper
  ☆27Updated 2 years ago
• SunPengChuan / wgdi-example
  ☆16Updated 3 months ago
• Chenglin20170390 / Haplotype-diversity
  This repository contains relevant code and explanation for ”Leveraging a phased pangenome to design ideal haplotypes for hybrid potato br…
  ☆28Updated 2 months ago
• i10labtitech / GINGER
  ☆27Updated last year
• Yandell-Lab / maker
  Genome Annotation Pipeline
  ☆35Updated 7 months ago
• xzhub / LTR_Finder
  LTR_Finder is an efficient program for finding full-length LTR retrotranspsons in genome sequences.
  ☆44Updated last year