alekseyzimin / EviAnn_release
This is the standalone version of the EviAnn pipeline
☆28Updated 3 weeks ago
Alternatives and similar repositories for EviAnn_release:
Users that are interested in EviAnn_release are comparing it to the libraries listed below
- Multi-genome synteny block visualization tool☆33Updated 3 months ago
- ☆23Updated 8 months ago
- ☆28Updated last year
- Improved Phased Assembler☆28Updated 3 years ago
- We developed GenomeSyn as a new tool for constructing and visualizing genome synteny, its novel design and implementation can serve as a …☆25Updated 3 years ago
- Yet another Hi-C scaffolding tool☆19Updated 6 months ago
- FastK based version of Merqury☆24Updated last week
- Toolkit for evolutionary analyses of linkage groups☆31Updated 9 months ago
- Domain based annotation of transposable elements☆19Updated 2 months ago
- A genome assembly assessment pipeline.☆37Updated last year
- An R package to identify and classify duplicated genes from whole-genome protein sequence data☆25Updated last month
- Chromosome-level synteny plotting using orthologous regions☆29Updated 7 months ago
- ☆35Updated last year
- Data analysis of Funannotate and Orthofinder outputs to Pangenome results☆19Updated 4 years ago
- ☆32Updated this week
- SyntenyFinder contains a collection of scripts for performing and visualizing macrosynteny analyses. It supports annotated chromosome-lev…☆29Updated 3 months ago
- Tool for assessing/improving assembly quality in extra-long tandem repeats☆46Updated 4 years ago
- A tool for recovering synteny blocks from multiple alignment☆30Updated 3 years ago
- VACmap: a long-read aligner specifically designed for complex structural variation discovery☆35Updated 5 months ago
- SV genotyper for long reads with a variation graph☆12Updated last month
- Tree House Explorer (THEx) is a novel genome browser for exploring phylogenetic and genomic data in one succinct place.☆14Updated last year
- ☆32Updated 5 months ago
- TransposonPSI involves a PSI-blast search of a protein or nucleotide sequence against a set of profiles of proteins corresponding to majo…☆13Updated 4 years ago
- Genome alignment and synteny plots☆30Updated last year
- ☆20Updated 8 months ago
- BUSCOMP: BUSCO Compiler and Comparison tool☆21Updated 7 months ago
- A tool for the recovery of unassembled telomeres from soft-clipped read alignments.☆36Updated 2 weeks ago
- Compute N50/NG50 and auN/auNG☆31Updated last year
- A shiny application to visualize MCscan result☆36Updated 2 years ago
- ☆26Updated last year