kli28 / sRNAminer

Related projects ⓘ

Alternatives and complementary repositories for sRNAminer

• bichangwei / PMAT
  An efficient assembly tool for plant mitochondrial genome
  ☆28Updated 5 months ago
• Jwindler / AutoHiC
  A novel genome assembly pipeline based on deep learning
  ☆54Updated last month
• hwc2021 / GSAT
  Graph-based Sequence Assembly Toolkit
  ☆20Updated 6 months ago
• moshi4 / CafePlotter
  A tool for plotting CAFE5 gene family expansion/contraction result
  ☆26Updated last year
• SwiftSeal / resistify
  Resistify is a command line program that identifies and classifies NLRs from protein sequences
  ☆26Updated this week
• abacus-gene / paml-tutorial
  paml documentation and tutorials
  ☆47Updated last year
• hewm2008 / RectChr
  Multi-level visualization of genomic statistical variables on rectangular chromosomes
  ☆35Updated 4 months ago
• steuernb / NLR-Annotator
  NLR-Annotator upload
  ☆60Updated last year
• YangJianshun / LINKVIEW2
  DNA序列比对结果 可视化展示工具
  ☆43Updated last year
• hillerlab / make_lastz_chains
  Portable solution to generate genome alignment chains using lastz
  ☆48Updated last month
• JiaoLab2021 / EVG
  A rapid and accurate ensemble pipeline for graph-based variant genotyping with lower depth of short reads
  ☆36Updated 4 months ago
• fanagislab / GCE
  GCE (genomic charactor estimator) is a bayes model based method to estimate the genome size, genomic repeat content and the heterozygsis…
  ☆47Updated 4 years ago
• CSU-KangHu / HiTE
  High-precision TE Annotator
  ☆65Updated last week
• sc-zhang / AlleleFinder
  AlleleFinder is a tool for identifying allele genes from polyploid genome.
  ☆22Updated 3 weeks ago
• meiyang12 / Genome-annotation-pipeline
  Genome annotation pipeline
  ☆53Updated 4 months ago
• hewm2008 / Reseqtools
  A Toolkit for analyzing next-generation DNA Re-Sequencing data
  ☆13Updated 2 years ago
• HongboDoll / TomatoSuperPanGenome
  Here, we sequence and de novo assemble chromosome-scale genomes of nine wild species and two cultivated accessions of tomato and construc…
  ☆47Updated 5 months ago
• simon19891216 / GFAP
  a software for annotating plant genes
  ☆19Updated 11 months ago
• Sunhh / NGS_data_processing
  Tool set for processing fasta/fastq/table formated data. Usually they are perl scripts.
  ☆51Updated 3 weeks ago
• DerKevinRiehl / transposon_annotation_tools
  A set of bioconda packages for transposon annotations. During my masterthesis I downloaded lots of these tools and I want to make it easi…
  ☆13Updated 2 years ago
• chenlianfu / geta
  ☆70Updated 4 months ago
• hewm2008 / VCF2PCACluster
  A new simple and efficient software to PCA and Cluster For popolation VCF File
  ☆61Updated 6 months ago
• sjteresi / TE_Density
  Python script calculating transposable element density for all genes in a genome. Publication: https://mobilednajournal.biomedcentral.com…
  ☆30Updated last month
• obenno / ShinySyn
  A shiny application to visualize MCscan result
  ☆33Updated 2 years ago
• phasegenomics / juicebox_scripts
  A collection of scripts for working with Hi-C data, Juicebox, and other genomic file formats
  ☆63Updated 3 years ago
• JiaoLab2021 / SynDiv
  A tool for quick and accurate calculation of syntenic diversity.
  ☆29Updated 2 months ago
• nclark-lab / RERconverge
  Analysis of convergence between organismal traits and DNA/protein sequences
  ☆46Updated 4 months ago
• 4ureliek / Parsing-RepeatMasker-Outputs
  Few scripts facilitating the extraction of info from Repeat Masker .out files
  ☆78Updated 3 years ago
• ShiuLab / PseudogenePipeline
  ☆36Updated last year
• Immortal2333 / Telomeres_and_Centromeres
  This is a method to find telomeres and centromeres in plants.
  ☆37Updated last year