JM-SONG / GenomeSynLinks
☆25Updated 3 years ago
Alternatives and similar repositories for GenomeSyn
Users that are interested in GenomeSyn are comparing it to the libraries listed below
Sorting:
- ☆21Updated last year
- Centromics: visualing centromeres with multiple omics data☆24Updated 6 months ago
- A genome assembly assessment pipeline.☆37Updated last year
- This repository contains relevant code and explanation for ”Leveraging a phased pangenome to design ideal haplotypes for hybrid potato br…☆32Updated 7 months ago
- ☆37Updated last month
- ☆27Updated 5 months ago
- Dynamic Elongation of a Genome Assembly Path☆22Updated last year
- This is a method to find telomeres and centromeres in plants.☆41Updated 2 years ago
- HiCAT new project☆29Updated 4 months ago
- ☆20Updated last year
- An Example of Subgenome Phasing for Complex Allopolyploidy☆13Updated 4 months ago
- Python script calculating transposable element density for all genes in a genome. Publication: https://mobilednajournal.biomedcentral.com…☆34Updated 11 months ago
- ☆15Updated 4 years ago
- a Semi-automated pipeline for assembling T2T genome☆21Updated 2 weeks ago
- A tool for quick and accurate calculation of syntenic diversity.☆42Updated this week
- ☆40Updated 2 years ago
- ☆30Updated 8 months ago
- The tools are used for displaying hic signal of genome☆24Updated 4 years ago
- Scripts that used in our chicken T2T manuscript.☆21Updated 2 years ago
- Automated pipeline for running CoalHMM☆13Updated last year
- ☆31Updated 6 months ago
- Centromics: visualing centromeres with multiple omics data☆20Updated last year
- HELIANO is a software for detection and classification of Helitron-like elements.☆30Updated 3 months ago
- A tool for performing collinearity-incorporating homology inference☆32Updated last year
- Genome haplotype assembly and assessment method☆12Updated last year
- An accurate and widely applicable pangenome graph-based variant genotyper for diploid and polyploid genomes☆39Updated 3 months ago
- C-Phasing/CPhasing: Phasing and scaffolding polyploid genomes based on Pore-C, HiFi-C/CiFi or Hi-C.☆57Updated 2 months ago
- Python scripts to run tandem repeat finder program (Benson, 1999) and parse the results☆12Updated 6 years ago
- ☆12Updated 2 years ago
- A complete telomere-to-telomere assembly of sheep: T2T-sheep1.0☆19Updated 10 months ago