Jianwei-Zhang / DEGAP
Dynamic Elongation of a Genome Assembly Path
☆21Updated 9 months ago
Alternatives and similar repositories for DEGAP:
Users that are interested in DEGAP are comparing it to the libraries listed below
- ☆22Updated 2 years ago
- ☆28Updated 6 months ago
- scripts for the project of seven thaliana genomes assembly☆38Updated 3 years ago
- ☆27Updated 3 years ago
- This repository contains relevant code and explanation for ”Leveraging a phased pangenome to design ideal haplotypes for hybrid potato br…☆27Updated last month
- Centromics: visualing centromeres with multiple omics data☆22Updated 3 months ago
- ☆39Updated last year
- ☆20Updated 6 months ago
- A genome assembly assessment pipeline.☆37Updated last year
- A tool for quick and accurate calculation of syntenic diversity.☆34Updated last month
- A tool for performing collinearity-incorporating homology inference☆28Updated last year
- ☆29Updated 2 months ago
- Centromics: visualing centromeres with multiple omics data☆17Updated last year
- ☆21Updated last year
- Python scripts to run tandem repeat finder program (Benson, 1999) and parse the results☆12Updated 5 years ago
- HiCAT new project☆27Updated last year
- Plant genome assembly and annotation pipeline using snakemake☆40Updated last year
- ☆20Updated last year
- ☆23Updated last year
- Reconstruction of ancestral genome maps☆16Updated 6 years ago
- Inferring natural selection by comparative population genomic analysis across species☆23Updated last year
- Genome haplotype assembly and assessment method☆12Updated last year
- ☆27Updated 2 years ago
- scripts☆15Updated 6 years ago
- An accurate and widely applicable pangenome graph-based variant genotyper for diploid and polyploid genomes☆21Updated this week
- A rapid and accurate ensemble pipeline for graph-based variant genotyping with lower depth of short reads☆37Updated 8 months ago
- ☆12Updated 2 years ago
- Analyses of sex chromosome evolution in songbirds☆15Updated 5 years ago