ablab / VerityMap
☆31Updated last year
Related projects ⓘ
Alternatives and complementary repositories for VerityMap
- Tool for assessing/improving assembly quality in extra-long tandem repeats☆45Updated 3 years ago
- Tool for globally phasing diploid assembly graphs with orthogonal data☆38Updated 2 months ago
- ☆28Updated 2 months ago
- assembly evaluation tool☆34Updated 2 years ago
- Create a pseudohaploid assembly from a partially resolved diploid assembly☆32Updated 4 years ago
- ☆32Updated 8 months ago
- A tool for the recovery of unassembled telomeres from soft-clipped read alignments.☆35Updated last week
- ☆30Updated this week
- ☆26Updated 3 months ago
- Pangenome Sequence Naming: a backwards-compatible hack to simplify the identification of samples and haplotypes in pangenomes☆31Updated 3 weeks ago
- Mabs, a genome assembly tool which optimizes parameters of Hifiasm and Flye☆26Updated 5 months ago
- Statistics and analysis for variation graphs☆31Updated 3 weeks ago
- A python script for finding telomeric repeats (TTAGGG/CCCTAA) in FASTA files☆33Updated 2 years ago
- Gapless provides combined scaffolding, gap-closing and assembly correction with long reads☆33Updated last year
- Identification of transposable element families from pangenome polymorphisms☆39Updated 2 months ago
- somatic SV calling on matched tumor-normal co-assembly graphs☆18Updated 3 months ago
- ☆31Updated 4 years ago
- A genome assembly assessment pipeline.☆36Updated 11 months ago
- ☆23Updated 9 months ago
- VACmap: a long-read aligner specifically designed for complex structural variation discovery☆27Updated this week
- Programs implementing the trio-binning genome assembly method☆19Updated 11 months ago
- Correcting errors in noisy long reads using variation graphs☆51Updated last year
- use long sequenced reads to close gaps in assemblies☆35Updated 6 years ago
- FastK based version of Merqury☆22Updated last week
- Compute N50/NG50 and auN/auNG☆31Updated last year
- ☆40Updated 6 months ago
- A Plant Presence/absence Variants Scanner and Pan-genome Construction Pipeline☆26Updated 3 years ago
- A tool for evaluating long-read de novo assembly results☆27Updated 2 months ago
- ☆21Updated 2 months ago
- SRY: an effective method for sorting long-read of sex-limited (Y or W) chromosome.☆18Updated last year