Hybrid error correction approach for long reads using overlap graph
☆11Sep 26, 2023Updated 2 years ago
Alternatives and similar repositories for HERO
Users that are interested in HERO are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Expedite large-scale identification of CNVs within predefined genomic regions. Online app available for those with GP2 Tier 2 Access.☆14Mar 16, 2026Updated 6 months ago
- Genome Assembly Validation via Inter-SUNK distances in ONT reads☆16Feb 20, 2023Updated 3 years ago
- ☆45Dec 29, 2025Updated 8 months ago
- The complete sequence of a Chinese individual☆14Oct 8, 2024Updated last year
- Mabs, a genome assembly tool that optimizes parameters of Hifiasm and Flye☆37Apr 20, 2026Updated 5 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- This pipeline is used to distinguish allotetraploid subgenomes.☆11Apr 8, 2024Updated 2 years ago
- ☆42May 19, 2025Updated last year
- ☆41Feb 22, 2023Updated 3 years ago
- ☆27Jun 27, 2026Updated 2 months ago
- Dynamic Elongation of a Genome Assembly Path☆28Jul 27, 2026Updated last month
- A Plant Presence/absence Variants Scanner and Pan-genome Construction Pipeline☆27May 24, 2021Updated 5 years ago
- ☆49Jul 23, 2025Updated last year
- Phasing reads with secondary alignments☆22Nov 30, 2024Updated last year
- Tools for working with agp files☆19Jun 26, 2025Updated last year
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- PG-SCUnK mesure quality of Pan-Genome Graphs using Single Copy and Universal k-mers☆25Feb 16, 2026Updated 7 months ago
- Kmer Analysis of Pileups for Genotyping☆41Jul 16, 2026Updated 2 months ago
- Mosaic Genome Assembler☆29Updated this week
- Sketch phylogenetic trees and networks☆26Updated this week
- Error correction of long reads☆16Jan 30, 2026Updated 7 months ago
- De novo chromosome-level scaffolding and phasing tool using Hi-C☆30Nov 23, 2025Updated 9 months ago
- A tool for visualization of pairwise alignments of multiple sequences☆19Aug 12, 2025Updated last year
- A command line tool (in Kotlin/JVM) for intuitively visualizing BAM alignments. (Currently unmaintained)☆11Jan 7, 2024Updated 2 years ago
- ☆43Oct 6, 2025Updated 11 months ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Tool for decomposition centromeric assemblies and long reads into monomers☆39Sep 17, 2022Updated 4 years ago
- Long-reads Gap-free Chromosome-scale Assembler☆79Mar 21, 2023Updated 3 years ago
- T2Tools is a toolset contains several tools for T2T assembly, and it is under development.☆17Sep 17, 2025Updated last year
- SRF: Satellite Repeat Finder☆109Jan 8, 2024Updated 2 years ago
- HAT is a set of tools for calling de novo variants from whole-genome sequencing data.☆24Nov 18, 2025Updated 10 months ago
- Transformer-based sequence correction method for genome assembly polishing☆111Mar 11, 2025Updated last year
- Make colorful identity heatmaps of genomic sequence☆139May 24, 2024Updated 2 years ago
- JTK -- a regional diploid genome assembler☆27Apr 22, 2026Updated 4 months ago
- ☆15Jan 19, 2022Updated 4 years ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- ☆21Jul 12, 2026Updated 2 months ago
- ☆33Apr 7, 2025Updated last year
- ☆15Aug 22, 2023Updated 3 years ago
- Convert Tandem Repeat Finder dat file output into gff3 format☆32Sep 7, 2026Updated 2 weeks ago
- blastn2dotplots: multiple dot-plot visualizer☆29Sep 15, 2025Updated last year
- ☆16Apr 3, 2023Updated 3 years ago
- ☆15Aug 6, 2025Updated last year