lly1214 / CAU-T2T-SheepLinks
A complete telomere-to-telomere assembly of sheep: T2T-sheep1.0
☆21Updated last year
Alternatives and similar repositories for CAU-T2T-Sheep
Users that are interested in CAU-T2T-Sheep are comparing it to the libraries listed below
Sorting:
- ☆29Updated 3 years ago
- A pipeline for genomic variant detection with genome assemblies at population scale☆34Updated 6 months ago
- ☆26Updated 3 years ago
- We developed GenomeSyn as a new tool for constructing and visualizing genome synteny, its novel design and implementation can serve as a …☆31Updated 3 years ago
- ☆44Updated 2 weeks ago
- This is a method to find telomeres and centromeres in plants.☆42Updated 2 years ago
- ☆21Updated last year
- Convert Tandem Repeat Finder dat file output into gff3 format☆29Updated last month
- Robust identification of orthologous Synteny with the Orthology Index☆36Updated 2 months ago
- Dynamic Elongation of a Genome Assembly Path☆23Updated 2 weeks ago
- A genome assembly assessment pipeline.☆37Updated 2 years ago
- Python scripts to run tandem repeat finder program (Benson, 1999) and parse the results☆13Updated 6 years ago
- ☆31Updated 8 months ago
- Yet another Hi-C scaffolding tool☆22Updated last year
- Domain based annotation of transposable elements☆21Updated 2 months ago
- ☆29Updated 2 weeks ago
- ☆17Updated 3 weeks ago
- ☆32Updated 11 months ago
- An R package to identify and classify duplicated genes from whole-genome protein sequence data☆30Updated 3 months ago
- A tool for performing collinearity-incorporating homology inference☆33Updated 2 years ago
- HELIANO is a software for detection and classification of Helitron-like elements.☆32Updated 6 months ago
- ☆26Updated 2 years ago
- ☆21Updated last year
- Add multiple thread function for genome comparison☆16Updated 4 years ago
- Inferring natural selection by comparative population genomic analysis across species☆25Updated 2 years ago
- This repository contains relevant code and explanation for ”Leveraging a phased pangenome to design ideal haplotypes for hybrid potato br…☆33Updated 2 months ago
- PanTE: A Comprehensive Framework for Transposable Element Discovery in Graph-based Pangenomes☆24Updated 2 months ago
- A tool for quick and accurate calculation of syntenic diversity.☆42Updated 3 months ago
- The codes to assemble two sorghum cultivars☆10Updated last year
- Generate pan-gene sets, given a collection of genome assemblies and corresponding gene models.☆19Updated this week