openvax / mhcflurryLinks
Peptide-MHC I binding affinity prediction
☆230Updated 3 weeks ago
Alternatives and similar repositories for mhcflurry
Users that are interested in mhcflurry are comparing it to the libraries listed below
Sorting:
- Python interface to running command-line and web-based MHC binding predictors☆99Updated last year
- Software for the visualization of sequence-function relationships☆207Updated last month
- WebLogo 3: Sequence Logos redrawn☆154Updated 2 weeks ago
- Github for files currently published in the IPD-IMGT/HLA FTP Directory hosted at the European Bioinformatics Institute☆250Updated this week
- 🗂️ [vdjdb.com is up and running!] Git-based TCR database storage & management. Submissions welcome!☆150Updated last week
- Official repository for the paper "Large-scale clinical interpretation of genetic variants using evolutionary data and deep learning". Jo…☆191Updated last year
- Deep Learning Methods for Parsing T-Cell Receptor Sequencing (TCRSeq) Data☆123Updated 4 months ago
- BRAID is a department within Genentech dedicated to advancing biological and clinical sciences through artificial intelligence.☆219Updated 6 months ago
- python tools for TCR:peptide-MHC modeling and analysis☆88Updated last year
- A collection of available Python tools for Proteomics analysis☆67Updated last week
- ☆86Updated 2 years ago
- HLA-II ligand predictor.☆46Updated 2 years ago
- BigMHC predicts MHC-I (neo)epitope presentation and immunogenicity☆60Updated last month
- A list of tools on proteomics using deep learning☆106Updated last year
- Predicting dynamic cellular protein-RNA interactions using deep learning and in vivo RNA structure☆66Updated last year
- predicting expression effects of human genome variants ab initio from sequence☆132Updated last year
- Python library for array programming on biological datasets. Documentation available at: https://bionumpy.github.io/bionumpy/☆291Updated 7 months ago
- Unified biological sequence manipulation in Python☆208Updated last year
- Tool for deep mutational scanning experiments.☆57Updated 11 months ago
- A visible neural network model for drug response prediction☆152Updated 2 years ago
- gReLU is a python library to train, interpret, and apply deep learning models to DNA sequences.☆314Updated 2 weeks ago
- Genomic Pre-trained Network☆321Updated last week
- ☆72Updated 3 years ago
- This repository contains the code for our manuscript - 'The evolution, evolvability, and engineering gene regulatory DNA'☆96Updated 2 years ago
- Deep Learning the T Cell Receptor Binding Specificity of Neoantigen☆89Updated 3 years ago
- TF MOtif Discovery from Importance SCOres☆165Updated last month
- Modelling RBP binding preferences to predict RPB binding sites☆11Updated 2 years ago
- ERGO-II, an updated version of ERGO including more features for TCR-peptide binding prediction☆34Updated 3 years ago
- Toolkit to train base-resolution deep neural networks on functional genomics data and to interpret them☆174Updated 4 months ago
- immuneML is a platform for machine learning analysis of adaptive immune receptor repertoire data.☆74Updated last week