MHC class II binding prediction
☆15Dec 27, 2022Updated 3 years ago
Alternatives and similar repositories for hmmhc
Users that are interested in hmmhc are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Quantitative proteomics workflow☆16Sep 30, 2022Updated 3 years ago
- ☆19Feb 20, 2018Updated 8 years ago
- MHC-peptide class II interaction prediction, binding, presentation☆22Mar 16, 2022Updated 4 years ago
- Somatic point mutation caller☆17Jul 8, 2016Updated 10 years ago
- MHC Class I and Class II neoantigen binding prediction☆37Jul 23, 2025Updated last year
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- HOT regions paper☆11Jun 18, 2019Updated 7 years ago
- ☆11Aug 5, 2020Updated 5 years ago
- t-distributed stochastic neighbor embedding for microbiota data☆12May 12, 2019Updated 7 years ago
- ☆10May 8, 2026Updated 2 months ago
- ☆12Sep 19, 2016Updated 9 years ago
- The Complete Python Antibody Library☆25Jun 23, 2026Updated last month
- BICSEQ2 pipeline for processing CPTAC3 somatic WGS CNA☆16Apr 13, 2021Updated 5 years ago
- a Contig Alignment Tool for Pairwise Assembly Comparison☆12Dec 11, 2019Updated 6 years ago
- Stringing beads - identifying research workflows from tool usage data (clustering)☆11Dec 28, 2016Updated 9 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- GAM workshop for NHS-R Community Conference 2023☆13Aug 8, 2025Updated 11 months ago
- piano - An R/Bioconductor package for gene set analysis☆14Sep 13, 2022Updated 3 years ago
- An R package for inferring the subclonal architecture of tumors☆124Mar 15, 2026Updated 4 months ago
- Subclonal Hierarchy Inference from Somatic Mutations☆21Feb 25, 2025Updated last year
- Python Toolbox For Rosetta Silent Files Processing☆17May 23, 2019Updated 7 years ago
- ☆49Jul 7, 2022Updated 4 years ago
- For MHC-I protein-peptide binding predictions: Deep Learning model with CNN and Snakemake workflow☆13Oct 22, 2018Updated 7 years ago
- Scripts related to building major-allele references for Bowtie and Bowtie 2☆13Jun 3, 2021Updated 5 years ago
- Dockstore implementation of CGP core WGS analysis☆30Jun 8, 2020Updated 6 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- 🏺 Exploring novel tumor epitope identification☆39Oct 7, 2020Updated 5 years ago
- Major Histocompatibility Complex (MHC) Binding Affinity Prediction☆10Apr 22, 2021Updated 5 years ago
- A Full Featured Multiple Sequence Alignment Editor.☆28May 21, 2018Updated 8 years ago
- Repository that contains all the data, code and manuscript files for a paper that explores the use of GAMs in biomedical research.☆22Jun 3, 2024Updated 2 years ago
- This is a read-only mirror of the CRAN R package repository. sensitivity — Global Sensitivity Analysis of Model Outputs and Importance …☆18Feb 27, 2026Updated 4 months ago
- Accessing Intra-Tumor Heterogeneity and Tracking Longitudinal and Spatial Clonal Evolutionary History by Next-Generation Sequencing.☆71Aug 22, 2021Updated 4 years ago
- ☆13Sep 18, 2017Updated 8 years ago
- Rust UMI Directional Adjacency Deduplicator☆15Nov 25, 2019Updated 6 years ago
- Package for analysis and experimental design of multiplexed imaging data☆12Mar 3, 2025Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- a Customized Proteogenomic Workflow for Neoantigen Prediction and Selection☆24Apr 6, 2022Updated 4 years ago
- A Pure-Python parser of HMMER3 output☆18Oct 14, 2024Updated last year
- elPrep reimplementations in C++ and Java, only for benchmark comparisons☆10Feb 13, 2023Updated 3 years ago
- Support code for NGS copy number algorithms. Takes a file of locations and a [cr|b]am file and generates a count of coverage of each alle…☆44Aug 24, 2022Updated 3 years ago
- Algorithm for the inference of cell types and lineage trees from single-cell RNA-seq data. Please download the R package from the RaceID3…☆15Dec 7, 2018Updated 7 years ago
- Code for the paper "OneProt: Towards Multi-Modal Protein Foundation Models"☆24Jun 30, 2026Updated 3 weeks ago
- Analysis for svaseq paper☆20Aug 20, 2014Updated 11 years ago