openvax / mhcnamesLinks
All the fun and adventure of MHC naming, now in Python
☆10Updated 2 years ago
Alternatives and similar repositories for mhcnames
Users that are interested in mhcnames are comparing it to the libraries listed below
Sorting:
- 🏺 Exploring novel tumor epitope identification☆34Updated 4 years ago
- Summary statistics for repertoires☆17Updated 2 years ago
- ☆38Updated last year
- Code and data used in The Great Repertoire Project☆30Updated 3 years ago
- Alignment and antibody assembly pipelines for Croote et al. (Science, 2018)☆10Updated 3 years ago
- Predict mutated T-cell epitopes from sequencing data☆30Updated 3 months ago
- Companion to "A genome-wide almanac of co-essential modules assigns function to uncharacterized genes" (https://doi.org/10.1101/827071)☆27Updated 2 years ago
- MHC Class I and Class II neoantigen binding prediction☆29Updated 2 years ago
- predicting peptide and TCR interaction☆20Updated 4 years ago
- Comparison of Adaptive Immune Receptor Repertoires☆27Updated 4 months ago
- Infer selection pressures on features of amino acid CDR3 sequences.☆25Updated last year
- PRedictor of IMmunogenic Epitopes☆20Updated 3 weeks ago
- HLA-I ligand predictor☆39Updated 5 months ago
- Tools related to the Genomics of Drug Sensitivity in Cancer (GDSC) projects (http://www.cancerrxgene.org/ )☆36Updated 3 years ago
- Generate Robust Disease-Specific Response Signatures from the LINCS-L1000 Data☆15Updated 3 years ago
- A python library for creating simulated regulatory DNA sequences☆38Updated 2 years ago
- Processing of single cell RNAseq data for the recovery of TCRs in python☆28Updated 4 years ago
- VDJ Clonotyping & Analysis Tools☆49Updated 2 months ago
- MuPeXI: the mutant peptide extractor and informer, a tool for predicting neo-epitopes from tumor sequencing data.☆50Updated 5 years ago
- Identify and quantify MHC eluted peptides from mass spectrometry raw data☆35Updated this week
- Scripts for building computational models of gene regulation with tensorflow☆27Updated 2 years ago
- ☆10Updated 4 years ago
- ☆40Updated 4 years ago
- Multi-study integration of cellular trajectories☆19Updated 5 years ago
- Tied Diffusion for Subnetwork Discovery (TieDIE)☆37Updated 3 years ago
- A bioinformatics best-practice analysis pipeline for epitope prediction and annotation☆45Updated this week
- Machine learning tutorial for biologists, designed for Oz Single Cells 2019☆15Updated 5 years ago
- predicts neoepitopes from phased somatic mutations detected using tumor/normal DNA-seq data☆27Updated last year
- 3D hotspot mutation proximity analysis tool☆47Updated 2 years ago
- University of Cambridge PhD thesis☆15Updated 4 years ago