☆14Nov 3, 2021Updated 4 years ago
Alternatives and similar repositories for MHCfovea
Users that are interested in MHCfovea are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆26Aug 27, 2026Updated last month
- PRedictor of IMmunogenic Epitopes☆37Sep 24, 2025Updated last year
- A simple BLOSUM module for python3☆18Nov 21, 2025Updated 10 months ago
- A sequence-based pan model for peptide-MHC I binding affinity prediction.☆27Apr 25, 2019Updated 7 years ago
- Parsing MHC nomenclature in the wild☆21Sep 23, 2026Updated 2 weeks ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- A package for detecting epistasis by machine learning☆22Jun 17, 2024Updated 2 years ago
- BigMHC predicts MHC-I (neo)epitope presentation and immunogenicity☆70Dec 17, 2025Updated 9 months ago
- DeepNovo workflow of neoantigen discovery by personalized de novo sequencing.☆12Nov 26, 2020Updated 5 years ago
- Supplementary data for the ACME algorithm☆24Oct 2, 2022Updated 4 years ago
- DNA and RNA variant calling pipelines with HLA typing and Neoantigen predictions☆12Jul 8, 2021Updated 5 years ago
- ☆21Mar 20, 2022Updated 4 years ago
- ☆15Aug 24, 2022Updated 4 years ago
- HLA-I ligand predictor☆47Mar 19, 2026Updated 6 months ago
- Original repo: https://github.com/nachoapps/dadguide-data☆11May 14, 2023Updated 3 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Peptide-MHC I binding affinity prediction☆280Updated this week
- predicts neoepitopes from phased somatic mutations detected using tumor/normal DNA-seq data☆27Sep 13, 2023Updated 3 years ago
- Snakemake workflow for neoantigen prediction☆15Sep 7, 2023Updated 3 years ago
- ☆15Mar 2, 2021Updated 5 years ago
- TLimmuno2: predicting MHC class II antigen immunogenicity through transfer learning☆13Jun 19, 2023Updated 3 years ago
- Bioinformatics pipeline for selecting patient-specific cancer neoantigen vaccines☆101Updated this week
- Pipeline to detect HLA disruption from WES and RNAseq data☆23Feb 17, 2025Updated last year
- ConvMHC - a web server for peptide-MHC class I binding predictions using deep convolutional neural networks☆18Sep 10, 2024Updated 2 years ago
- MODELLER-based, anchor restrained, Peptide-MHC Modelling pipeline☆32Feb 16, 2026Updated 7 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Quantifiable predictive features define epitope-specific T cell receptor repertoires☆13Dec 8, 2022Updated 3 years ago
- All the fun and adventure of MHC naming, now in Python☆10Apr 5, 2026Updated 6 months ago
- Deep Learning the T Cell Receptor Binding Specificity of Neoantigen☆93Jun 14, 2022Updated 4 years ago
- HLA-II ligand predictor.☆52Aug 25, 2026Updated last month
- MHCAttnNet: Allele-Peptide predictions for class I & class II MHC alleles☆30Feb 14, 2021Updated 5 years ago
- Cluster up to millions of peptide sequences on shared sequence motifs.☆13Oct 1, 2018Updated 8 years ago
- ☆12Mar 16, 2024Updated 2 years ago
- OCEAN - Optimized Cross rEActivity estimatioN☆12Apr 29, 2020Updated 6 years ago
- Github for files currently published in the IPD-MHC FTP Directory hosted at the European Bioinformatics Institute☆16Jul 26, 2026Updated 2 months ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- ☆13Sep 21, 2023Updated 3 years ago
- Deep-learning empowered prediction and generation of immunogenic epitopes for T cell immunity☆80Apr 1, 2023Updated 3 years ago
- Seq2Neo: a comprehensive pipeline for cancer neoantigen immunogenicity prediction☆23Feb 17, 2023Updated 3 years ago
- hAMRoaster is an analysis pipeline that can compare the output of tools for detecting AMR genes and provide metrics of their performance☆23Mar 8, 2024Updated 2 years ago
- ☆49Jul 7, 2022Updated 4 years ago
- QBRC Neoantigen calling pipeline with CSiN calculation embedded☆26Feb 8, 2022Updated 4 years ago
- ☆21Sep 16, 2026Updated 3 weeks ago