Alternatives and similar repositories for MHCAttnNet

Users that are interested in MHCAttnNet are comparing it to the libraries listed below

• pcpLiu / DeepSeqPanII
  A sequence-based pan model for peptide-MHC II binding affinity prediction.
  ☆21Updated 3 years ago
• pcpLiu / DeepSeqPan
  A sequence-based pan model for peptide-MHC I binding affinity prediction.
  ☆26Updated 6 years ago
• s6juncheng / BERTMHC
  MHC-peptide class II interaction prediction, binding, presentation
  ☆23Updated 3 years ago
• alexarnimueller / modlAMP
  Python package for peptide sequence generation, peptide descriptor calculation and sequence analysis.
  ☆61Updated 7 months ago
• duolinwang / MusiteDeep_web
  This repository contains the stand-alone tool for MusiteDeep server
  ☆34Updated 4 years ago
• aqlaboratory / hsm
  Code associated with "Biophysical prediction of protein-peptide interactions and signaling networks using machine learning."
  ☆70Updated last year
• gitter-lab / nn4dms
  Neural networks for deep mutational scanning data
  ☆70Updated 4 months ago
• churchlab / low-N-protein-engineering
  Code and data to reproduce analyses in Biswas et al. (2020) "Low-N protein engineering with data-efficient deep learning".
  ☆59Updated 4 years ago
• Rostlab / bindPredict
  Prediction of binding residues for metal ions, nucleic acids, and small molecules.
  ☆34Updated last month
• GreiffLab / manuscript_ab_epitope_interaction
  ☆25Updated last year
• frankligy / DeepImmuno
  Deep-learning empowered prediction and generation of immunogenic epitopes for T cell immunity
  ☆73Updated 2 years ago
• eliberis / parapred
  Paratope Prediction using Deep Learning
  ☆61Updated 2 years ago
• gf712 / AbPyTools
  Python package for analysis of antibody heavy and light chains
  ☆25Updated 5 years ago
• alchemab / parapred-pytorch
  PyTorch implementation of Parapred (Liberis et al., 2018) with Paratyping (Richardson et al., 2021)
  ☆20Updated 2 years ago
• HYsxe / ACME
  Supplementary data for the ACME algorithm
  ☆23Updated 3 years ago
• largelymfs / deepcontact
  DeepContact Software
  ☆26Updated 7 years ago
• sameerkhurana10 / DSOL_rv0.2
  deep protein solubility prediction
  ☆40Updated 6 years ago
• raghavagps / Pfeature
  A software package for computing features of peptides and proteins
  ☆64Updated last year
• dmnfarrell / epitopepredict
  Python package and command line tool for epitope prediction
  ☆52Updated last year
• brennanaba / ImmuneBuilder
  Predict the structure of immune receptor proteins
  ☆56Updated 11 months ago
• nstrodt / UDSMProt
  Protein sequence classification with self-supervised pretraining
  ☆82Updated 3 years ago
• dohlee / antiberty-pytorch
  An unofficial re-implementation of AntiBERTy, an antibody-specific protein language model, in PyTorch.
  ☆25Updated last year
• csi-greifflab / manuscript_insilico_antibody_generation
  ☆23Updated 4 years ago
• xinyu-dev / annotate_v
  Antibody Annotation - Annotate VH and VL sequences (FR and CDR) in Python
  ☆30Updated 2 years ago
• Superzchen / iFeatureOmega-GUI
  iFeatureOmega is a comprehensive platform for generating, analyzing and visualizing more than 170 representations for biological sequence…
  ☆31Updated 3 years ago
• tadorfer / protlearn
  A Python package for extracting protein sequence features
  ☆63Updated 3 years ago
• oxpig / saab_plus
  ☆26Updated 5 years ago
• psipred / DeepCov
  Fully convolutional neural networks for protein residue-residue contact prediction
  ☆43Updated 6 years ago
• Wang-lab-UCSD / RESP
  The code used to generate the results from Parkinson / Hard et al. 2022
  ☆17Updated 4 months ago
• normandavey / AlphaFold2-IDR-complex-prediction
  ☆39Updated 4 years ago