IEDB / PEPMatchLinks
☆23Updated 3 weeks ago
Alternatives and similar repositories for PEPMatch
Users that are interested in PEPMatch are comparing it to the libraries listed below
Sorting:
- PRedictor of IMmunogenic Epitopes☆25Updated 2 months ago
- Comprehensive Python client for the Uniprot REST API☆53Updated 2 months ago
- Comparison of Adaptive Immune Receptor Repertoires☆28Updated 10 months ago
- ☆38Updated 2 years ago
- MHC Class I and Class II neoantigen binding prediction☆32Updated 4 months ago
- Absolve antibody variable domain sequence analysis☆18Updated 7 years ago
- Deep learning model to predict degron sequences☆19Updated 2 years ago
- python based queries for the proteomesoflife neo4j network database☆14Updated 5 years ago
- Flexible analysis of high-content CRISPR screening☆30Updated 3 months ago
- HLA-II ligand predictor.☆45Updated 2 years ago
- R package for functionally scoring phosphorylation sites☆21Updated 6 years ago
- A collection of useful functions for bioinformatics data analysis☆24Updated 4 months ago
- Functional Embedding of Gene Signatures☆48Updated last year
- immuneML is a platform for machine learning analysis of adaptive immune receptor repertoire data.☆73Updated 2 weeks ago
- MaxQuant with snakemake and singularity workflow for open and scalable mass spectrometry data analysis on Linux computing clusters☆27Updated 7 years ago
- Identify and quantify MHC eluted peptides from mass spectrometry raw data☆41Updated 2 weeks ago
- ☆31Updated 5 months ago
- VDJ assignment and antibody sequence annotation. Scalable from a single sequence to billions of sequences.☆44Updated last week
- ☆38Updated 3 months ago
- Absolute quantification package based on quantms.io☆16Updated 2 months ago
- RNA structure probing and post-transcriptional modifications mapping high-throughput data analysis☆43Updated 3 weeks ago
- Companion to "A genome-wide almanac of co-essential modules assigns function to uncharacterized genes" (https://doi.org/10.1101/827071)☆27Updated 3 years ago
- A bioinformatics best-practice analysis pipeline for epitope prediction and annotation☆49Updated 2 weeks ago
- HLA-I ligand predictor☆43Updated 2 months ago
- Useful functions for manipulating Multiplex Assay of Variant Effect datasets.☆10Updated 10 months ago
- TCRconv is a deep learning model for predicting recognition between T cell receptors and epitopes. It uses protBERT embeddings for the TC…☆25Updated 3 years ago
- 🧪 🖥 Transparent exploration of machine learning for biomarker discovery from proteomics and omics data☆39Updated last year
- Epitope immunogenicity prediction through in silico TCR-peptide contact potential profiling.☆25Updated 2 years ago
- R tool to analyse and integrate multiple -omics data☆15Updated 6 months ago
- Python package and command line tool for epitope prediction☆52Updated last year