MHC Class I and Class II neoantigen binding prediction
☆35Jul 23, 2025Updated 8 months ago
Alternatives and similar repositories for mhcnuggets
Users that are interested in mhcnuggets are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Peptide-MHC I binding affinity prediction☆236Updated this week
- A sequence-based pan model for peptide-MHC I binding affinity prediction.☆26Apr 25, 2019Updated 6 years ago
- ☆11Aug 5, 2020Updated 5 years ago
- HLA-II ligand predictor.☆46Apr 6, 2023Updated 2 years ago
- BigMHC predicts MHC-I (neo)epitope presentation and immunogenicity☆60Dec 17, 2025Updated 3 months ago
- MHC class II binding prediction☆14Dec 27, 2022Updated 3 years ago
- Supplementary data for the ACME algorithm☆23Oct 2, 2022Updated 3 years ago
- A Python tool for prediction MHC ligand☆34Feb 10, 2019Updated 7 years ago
- A Collection of Platform, Tools, and Resources for Antibody Engineering☆21Jun 30, 2023Updated 2 years ago
- Python interface to running command-line and web-based MHC binding predictors☆100Updated this week
- Python package and command line tool for epitope prediction☆53Aug 2, 2024Updated last year
- MHC-II presentation predictor☆13Aug 11, 2023Updated 2 years ago
- HLA-I ligand predictor☆44Sep 24, 2025Updated 5 months ago
- A python tool to do comparative analysis of mulitple single cell datasets.☆21Oct 25, 2019Updated 6 years ago
- immuneML is a platform for machine learning analysis of adaptive immune receptor repertoire data.☆74Mar 15, 2026Updated last week
- ☆14Nov 3, 2021Updated 4 years ago
- Build contrasts for models defined with formulaic☆12Mar 16, 2026Updated last week
- Access public biological ontologies.☆15Aug 7, 2024Updated last year
- ☆19Feb 20, 2018Updated 8 years ago
- A neoantigen calling pipeline begins from variants record file (MAF) (Not maintain now)☆30Aug 30, 2019Updated 6 years ago
- MuPeXI: the mutant peptide extractor and informer, a tool for predicting neo-epitopes from tumor sequencing data.☆52Sep 12, 2019Updated 6 years ago
- ☆41Jun 24, 2025Updated 8 months ago
- ☆12Nov 7, 2025Updated 4 months ago
- Shadow objects for AnnData and MuData (experimental)☆12Feb 28, 2025Updated last year
- Feynman-Kac steering for controllable protein diffusion☆31Jan 14, 2026Updated 2 months ago
- Sequence-based prediction of peptide-TCR interactions using paired chain data☆13Feb 2, 2026Updated last month
- Python interface to amino acid properties and IEDB☆57Oct 7, 2024Updated last year
- Open-source java library to handle different file format standards for proteomics. Specially ms-data-core-api is good for MetaData repres…☆12Oct 23, 2019Updated 6 years ago
- python module for querying the vicc knowledgebase integration datastore☆11Jul 6, 2023Updated 2 years ago
- Antigen-receptor Design Against Peptide-MHC Targets☆20Jan 9, 2026Updated 2 months ago
- Tool for Motif Deconvolution in large HLA-II ligand datasets without the need of prior alignment.☆15Feb 17, 2025Updated last year
- Probabilistic single-cell pseudotime with Edward+Tensorflow☆12Oct 5, 2017Updated 8 years ago
- open source code for Tencent tFold☆146Mar 14, 2025Updated last year
- ☆171Updated this week
- ☆15Nov 24, 2025Updated 3 months ago
- Data portal for exploring and accessing data☆16Oct 30, 2023Updated 2 years ago
- A minimal gene set characterizes multiple classes of tumor-specific TIL among different cancer types☆11Mar 4, 2025Updated last year
- 📂 HLA allele frequencies in tab-delimited format, downloaded from AFND.☆23Apr 23, 2024Updated last year
- Deep Learning the T Cell Receptor Binding Specificity of Neoantigen☆90Jun 14, 2022Updated 3 years ago