bm2-lab / neoFusionLinks
☆13Updated 5 years ago
Alternatives and similar repositories for neoFusion
Users that are interested in neoFusion are comparing it to the libraries listed below
Sorting:
- A novel PSSM based software for predicting class I peptide-HLA binding affinity☆17Updated 8 years ago
- A Python3-base pipeline for translated circular RNA(circRNA) identification☆19Updated 4 months ago
- QBRC Neoantigen calling pipeline with CSiN calculation embedded☆26Updated 4 years ago
- ☆48Updated 3 years ago
- A pipeline for identifying indel derived neoantigens using RNA-Seq data☆30Updated 3 years ago
- A computational workflow for exitron splicing identification☆14Updated last year
- Public repository containing research code for the TCGA PanCanAtlas Splicing project☆42Updated 5 years ago
- Benchmarking of aligners and variant callers for Whole Exome Sequencing data☆20Updated 7 years ago
- The Spatial Splicing-derived Neoantigen Identifier Pipeline (SSNIP) allows for the precise characterization of neoantigens derived from c…☆20Updated 10 months ago
- 🏺 Exploring novel tumor epitope identification☆38Updated 5 years ago
- MAnorm2 for Normalizing and Comparing ChIP-seq Samples☆32Updated 3 years ago
- GDCRNATools: an R/Bioconductor package for integrative analysis of lncRNA, miRNA and mRNA data in GDC☆68Updated 2 years ago
- GREIN : GEO RNA-seq Experiments Interactive Navigator☆50Updated 6 years ago
- documentation for trackViewer☆29Updated 6 years ago
- ⚙️ Matching T-cell repertoire against a database of TCR antigen specificities☆39Updated 7 years ago
- pTuneos: prioritizing Tumor neoantigen from next-generation sequencing data☆38Updated 4 years ago
- Workshop • Analysis of RNA-seq data☆37Updated last year
- nextNEOpi: a comprehensive pipeline for computational neoantigen prediction☆83Updated 8 months ago
- A continually expanding collection of RNA-seq tools☆53Updated this week
- Integrative analysis pipeline for pooled CRISPR functional genetic screens☆32Updated 2 years ago
- Seq2Neo: a comprehensive pipeline for cancer neoantigen immunogenicity prediction☆22Updated 2 years ago
- ☆23Updated 3 years ago
- Code and additional processed data for manuscript "Tumor and Microenvironment Evolution during Immunotherapy with Nivolumab"; see for man…☆54Updated 8 years ago
- ☆63Updated 5 years ago
- GLASS consortium☆42Updated 5 years ago
- A neoantigen calling pipeline begins from variants record file (MAF) (Not maintain now)☆30Updated 6 years ago
- ☆18Updated 10 years ago
- direct comparison of circular and linear RNA expression☆23Updated 5 years ago
- 2017_2018 single cell RNA sequencing Workshop UCD_UCB_UCSF☆37Updated 7 years ago
- Code related to the Celligner manuscript☆46Updated 5 years ago