HYsxe / ACMELinks
Supplementary data for the ACME algorithm
☆23Updated 2 years ago
Alternatives and similar repositories for ACME
Users that are interested in ACME are comparing it to the libraries listed below
Sorting:
- A sequence-based pan model for peptide-MHC II binding affinity prediction.☆20Updated 3 years ago
- This repository contains the stand-alone tool for MusiteDeep server☆33Updated 4 years ago
- MHC-peptide class II interaction prediction, binding, presentation☆21Updated 3 years ago
- CapsNet for Protein Post-translational Modification site prediction.☆25Updated 5 years ago
- Deep-learning empowered prediction and generation of immunogenic epitopes for T cell immunity☆68Updated 2 years ago
- A sequence-based pan model for peptide-MHC I binding affinity prediction.☆25Updated 6 years ago
- Prediction of binding residues for metal ions, nucleic acids, and small molecules.☆32Updated 5 months ago
- Paratope Prediction using Deep Learning☆59Updated 2 years ago
- Antibody Annotation - Annotate VH and VL sequences (FR and CDR) in Python☆30Updated last year
- Improving protein function prediction with synthetic feature samples created by generative adversarial networks☆22Updated 4 years ago
- Amino Acid Embedding Representation as Machine Learning Features☆19Updated 6 years ago
- PyTorch implementation of bimodal neural networks for drug-cell (pharmarcogenomics) and drug-protein (proteochemometrics) interaction pre…☆51Updated last year
- PaccMann models for protein language modeling☆42Updated 3 years ago
- Code associated with "Biophysical prediction of protein-peptide interactions and signaling networks using machine learning."☆70Updated last year
- Python package for peptide sequence generation, peptide descriptor calculation and sequence analysis.☆60Updated 2 months ago
- DeepContact Software☆26Updated 6 years ago
- An unofficial re-implementation of AntiBERTy, an antibody-specific protein language model, in PyTorch.☆24Updated last year
- deep protein solubility prediction☆36Updated 6 years ago
- Interpretation by Deep Generative Masking for Biological Sequences☆37Updated 3 years ago
- Machine learning models for antibody sequences in PyTorch☆39Updated 4 years ago
- MHCAttnNet: Allele-Peptide predictions for class I & class II MHC alleles☆29Updated 4 years ago
- GraphSite: protein-DNA binding site prediction using graph transformer and predicted protein structures☆59Updated 10 months ago
- Code and data to reproduce analyses in Biswas et al. (2020) "Low-N protein engineering with data-efficient deep learning".☆58Updated 4 years ago
- ERGO is a deep learing based model for predicting TCR-peptide binding.☆17Updated 2 years ago
- ☆25Updated last year
- ☆37Updated 4 months ago
- Python package for analysis of antibody heavy and light chains☆25Updated 4 years ago
- ☆29Updated 4 years ago
- Quantifying the nativeness of antibody sequences using long short-term memory networks☆17Updated 3 years ago
- Code and data used in https://doi.org/10.1101/2021.08.01.454656☆53Updated 3 years ago