Alternatives and similar repositories for mhcgnomes:

Users that are interested in mhcgnomes are comparing it to the libraries listed below

• GfellerLab / MixMHCpred
  HLA-I ligand predictor
  ☆31Updated last month
• Edinburgh-Genome-Foundry / Caravagene
  🎨 Python library to plot multi-part genetic constructs
  ☆25Updated last year
• usnistgov / lantern
  Interpretable genotype-phenotype landscape modeling
  ☆35Updated last year
• althonos / lightmotif
  A lightweight platform-accelerated library for biological motif scanning using position weight matrices.
  ☆42Updated this week
• benchling / clustalo-python
  A Python wrapper around Clustal Omega (http://www.clustal.org/omega/)
  ☆21Updated 3 years ago
• kundajelab / simdna
  A python library for creating simulated regulatory DNA sequences
  ☆37Updated last year
• nf-core / epitopeprediction
  A bioinformatics best-practice analysis pipeline for epitope prediction and annotation
  ☆43Updated this week
• statbiophys / SONIA
  Infer selection pressures on features of amino acid CDR3 sequences.
  ☆23Updated 9 months ago
• kohanlee1995 / MHCfovea
  ☆14Updated 3 years ago
• openvax / mhcnames
  All the fun and adventure of MHC naming, now in Python
  ☆10Updated 2 years ago
• nstrodt / USMPep
  Major Histocompatibility Complex (MHC) Binding Affinity Prediction
  ☆10Updated 3 years ago
• jbloomlab / alignparse
  Align sequences and then parse features.
  ☆17Updated 5 months ago
• VariantEffect / mavetools
  Useful functions for manipulating Multiplex Assay of Variant Effect datasets.
  ☆10Updated 8 months ago
• Edinburgh-Genome-Foundry / Geneblocks
  Find common blocks and differences between DNA sequences
  ☆40Updated 2 years ago
• jrderuiter / geneviz
  Library for visualising genomic features in Python.
  ☆15Updated 7 years ago
• Edinburgh-Genome-Foundry / BandWitch
  💫 Computer-aided DNA assembly validation and identification from restriction digests.
  ☆15Updated 2 years ago
• Pharmaco-OmicsLab / EasyPubPlot
  Shiny app to easily create publishable plots for scientific papers
  ☆26Updated 2 months ago
• kundajelab / coessentiality
  Companion to "A genome-wide almanac of co-essential modules assigns function to uncharacterized genes" (https://doi.org/10.1101/827071)
  ☆27Updated 2 years ago
• Edinburgh-Genome-Foundry / genome_collector
  Easily download genomes and build BLAST/Bowtie indexes in Python
  ☆21Updated 2 years ago
• SchubertLab / epytope
  ☆20Updated 4 months ago
• Edinburgh-Genome-Foundry / DnaWeaver
  A route planner for DNA assembly
  ☆31Updated last year
• ababaian / bioFreelancers
  Freelance bioinformaticians directory
  ☆9Updated last year
• TRON-Bioinformatics / neofox
  Annotation of mutated peptide sequences with published or novel potential neoantigen descriptors
  ☆29Updated 5 months ago
• VariantEffect / MaveReferences
  Table of Multiplexed Assay of Variant Effect (MAVE) studies
  ☆11Updated last year
• althonos / pytrimal
  Cython bindings and Python interface to trimAl, a tool for automated alignment trimming. Now with SIMD!
  ☆20Updated 5 months ago
• dmnfarrell / pybioviz
  bioinformatics visualization tools with pyviz/bokeh
  ☆20Updated last year
• biocommons / bioutils
  provides common tools and lookup tables used primarily by the hgvs and uta packages
  ☆22Updated 2 months ago
• openvax / pepdata
  Python interface to amino acid properties and IEDB
  ☆55Updated 3 months ago
• loosolab / UROPA
  Universal RObust Peak Annotator
  ☆15Updated last year
• jvrana / benchling-api
  A python wrapper for the benchling api
  ☆50Updated 4 years ago