pirl-unc / mhcgnomes
Parsing MHC nomenclature in the wild
☆16Updated 4 months ago
Alternatives and similar repositories for mhcgnomes:
Users that are interested in mhcgnomes are comparing it to the libraries listed below
- A lightweight platform-accelerated library for biological motif scanning using position weight matrices.☆43Updated this week
- All the fun and adventure of MHC naming, now in Python☆10Updated 2 years ago
- ☆14Updated 3 years ago
- Infer selection pressures on features of amino acid CDR3 sequences.☆24Updated 10 months ago
- programs and scripts, mainly python, for analyses related to nucleic or protein sequences☆24Updated this week
- Useful functions for manipulating Multiplex Assay of Variant Effect datasets.☆10Updated 3 weeks ago
- provides common tools and lookup tables used primarily by the hgvs and uta packages☆22Updated 4 months ago
- Align sequences and then parse features.☆17Updated 6 months ago
- 🎨 Python library to plot multi-part genetic constructs☆25Updated last year
- HLA-I ligand predictor☆32Updated 2 months ago
- Interpretable genotype-phenotype landscape modeling☆35Updated last year
- 💫 Computer-aided DNA assembly validation and identification from restriction digests.☆15Updated 2 years ago
- Library for visualising genomic features in Python.☆15Updated 7 years ago
- A python library for creating simulated regulatory DNA sequences☆38Updated 2 years ago
- Universal RObust Peak Annotator☆15Updated last year
- 🎺 Plot DNA digestion band patterns with Python☆19Updated 2 years ago
- A Bio2BEL package for integrating pathway-related information from KEGG in BEL☆13Updated 3 years ago
- Single-Cell RNA-seq pseudo-aligner☆51Updated 9 months ago
- Python interface to amino acid properties and IEDB☆55Updated 4 months ago
- Generic methods, types and modules for the BioJulia ecosystem.☆12Updated 7 months ago
- Major Histocompatibility Complex (MHC) Binding Affinity Prediction☆10Updated 3 years ago
- ClinVar Mapping and Annotation Toolkit☆19Updated 2 weeks ago
- ☆19Updated 5 months ago
- Alignment and antibody assembly pipelines for Croote et al. (Science, 2018)☆10Updated 3 years ago
- PyIOmica (pyiomica) is a Python package for omics analyses.☆15Updated 2 years ago
- A Python wrapper around Clustal Omega (http://www.clustal.org/omega/)☆21Updated 3 years ago
- Easily download genomes and build BLAST/Bowtie indexes in Python☆21Updated 2 years ago
- Proteins as words, genomes as documents.☆20Updated 4 years ago
- toolkit for file system virtualisation of random access compressed FASTA, FAI, DICT & TWOBIT files☆22Updated 6 months ago