GfellerLab / PRIMELinks
PRedictor of IMmunogenic Epitopes
☆23Updated 2 months ago
Alternatives and similar repositories for PRIME
Users that are interested in PRIME are comparing it to the libraries listed below
Sorting:
- HLA-II ligand predictor.☆44Updated 2 years ago
- Comparison of Adaptive Immune Receptor Repertoires☆27Updated 6 months ago
- Seq2Neo: a comprehensive pipeline for cancer neoantigen immunogenicity prediction☆21Updated 2 years ago
- Absolve antibody variable domain sequence analysis☆17Updated 6 years ago
- HLA-I ligand predictor☆41Updated 7 months ago
- ☆38Updated last year
- ☆29Updated last month
- Tool for Motif Deconvolution in large HLA-II ligand datasets without the need of prior alignment.☆13Updated 5 months ago
- flexible CDR based distance metrics☆66Updated 11 months ago
- A toolkit for optimal workflow recommendation for proteomics data differential expression analysis☆16Updated 9 months ago
- MHC Class I and Class II neoantigen binding prediction☆30Updated last week
- NetTCR-2.0. Sequence-based prediction of peptide-TCR binding☆35Updated 3 years ago
- ☆18Updated last year
- DRUGZ software☆23Updated 3 years ago
- ☆11Updated 5 years ago
- ☆48Updated 3 years ago
- TCRGP, a novel Gaussian process method that can predict if TCRs recognize certain epitopes. This method can utilize different CDR sequenc…☆30Updated 2 years ago
- ☆17Updated 3 years ago
- Deep Learning Method to Identify Cancer Associated TCRs☆47Updated 3 years ago
- 🏺 Exploring novel tumor epitope identification☆34Updated 4 years ago
- Epitope immunogenicity prediction through in silico TCR-peptide contact potential profiling.☆24Updated last year
- TCRconv is a deep learning model for predicting recognition between T cell receptors and epitopes. It uses protBERT embeddings for the TC…☆25Updated 2 years ago
- ERGO-II, an updated version of ERGO including more features for TCR-peptide binding prediction☆33Updated 3 years ago
- immuneML is a platform for machine learning analysis of adaptive immune receptor repertoire data.☆68Updated this week
- A shiny-based web tool for interactive analysis of DepMap data☆23Updated 4 years ago
- Immunoglobulin and T-Cell receptor rearrangement software☆49Updated last year
- Multi-Omics Peptide Generator☆23Updated 2 weeks ago
- python based queries for the proteomesoflife neo4j network database☆14Updated 5 years ago
- Code and data used in The Great Repertoire Project☆30Updated 4 years ago
- QBRC Neoantigen calling pipeline with CSiN calculation embedded☆24Updated 3 years ago