Major Histocompatibility Complex (MHC) Binding Affinity Prediction
☆10Apr 22, 2021Updated 4 years ago
Alternatives and similar repositories for USMPep
Users that are interested in USMPep are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Quantitative proteomics workflow☆15Sep 30, 2022Updated 3 years ago
- ☆18Aug 9, 2019Updated 6 years ago
- ☆14Jun 12, 2023Updated 2 years ago
- A reporting pipeline for visualization of immunopeptidomics MS data.☆15Nov 19, 2022Updated 3 years ago
- ☆13Dec 5, 2024Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Protein sequence classification with self-supervised pretraining☆82Nov 29, 2021Updated 4 years ago
- FunnyBirds: A Synthetic Vision Dataset for a Part-Based Analysis of Explainable AI Methods (ICCV 2023)☆21Feb 24, 2026Updated last month
- Cross-model Retrieval between 13C NMR Spectrum and Structure☆20Sep 18, 2021Updated 4 years ago
- ☆13Aug 29, 2020Updated 5 years ago
- Updated DANPOS2 to work with python3☆24Feb 25, 2026Updated last month
- Scalable, accurate and sensitive protein group FDRs for large-scale mass spectrometry experiments☆13Mar 25, 2026Updated 2 weeks ago
- ☆11Aug 5, 2020Updated 5 years ago
- ☆10Feb 4, 2025Updated last year
- Some scoring functions for predicting the effects of mutations on protein sequences using ESM-2☆11Dec 10, 2023Updated 2 years ago
- Wordpress hosting with auto-scaling - Free Trial • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- High quality in silico spectral library generation for data-independent acquisition proteomics☆20Mar 31, 2026Updated 2 weeks ago
- plotnineSeqSuite: a Python package for visualizing sequence data using ggplot2 style☆17Dec 19, 2025Updated 3 months ago
- For MHC-I protein-peptide binding predictions: Deep Learning model with CNN and Snakemake workflow☆13Oct 22, 2018Updated 7 years ago
- DL model to predict HLA peptide presentation☆16Jan 31, 2024Updated 2 years ago
- Python package and command line tool for epitope prediction☆53Aug 2, 2024Updated last year
- ☆12Sep 21, 2023Updated 2 years ago
- A Python package for extracting protein sequence features☆62Aug 23, 2022Updated 3 years ago
- k-mer probability logo☆11Jan 20, 2023Updated 3 years ago
- GlyCombo, a combinatorial glycan composition assignment tool☆12Nov 16, 2025Updated 4 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Group-DIA, a software for analyzing multiple DIA data files☆13Dec 5, 2016Updated 9 years ago
- A Bio2BEL package for integrating pathway-related information from KEGG in BEL☆13Feb 11, 2022Updated 4 years ago
- MHC-II presentation predictor☆13Aug 11, 2023Updated 2 years ago
- MHC Class I and Class II neoantigen binding prediction☆37Jul 23, 2025Updated 8 months ago
- ☆17Sep 14, 2022Updated 3 years ago
- A SNP Visualizer - Javascript☆18Oct 22, 2014Updated 11 years ago
- A label free quantification tool.☆19Jan 13, 2026Updated 3 months ago
- Software for data-independent acquisition (DIA) proteomic data processing with deep representation features.☆15Sep 19, 2025Updated 6 months ago
- Navigation links (and brief descriptions) to my repositories.☆12Nov 25, 2025Updated 4 months ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- MHCAttnNet: Allele-Peptide predictions for class I & class II MHC alleles☆30Feb 14, 2021Updated 5 years ago
- MHC class II binding prediction☆15Dec 27, 2022Updated 3 years ago
- A fast, alignment-free method for estimating sequence conservation using protein sequence embedding☆20Feb 6, 2023Updated 3 years ago
- End-to-end deep learning toolkit for predicting protein binding sites and motifs.☆45Feb 26, 2019Updated 7 years ago
- Simple Markdown Wiki in your Dropbox.☆12Jun 16, 2018Updated 7 years ago
- Multi-Omics Peptide Generator☆30Nov 6, 2025Updated 5 months ago
- A tool for summarizing open search results☆16Dec 19, 2025Updated 3 months ago