Amino acid embedding and Convolutional Neural Network for HLA Class I-peptide binding prediction
☆26Aug 3, 2017Updated 9 years ago
Alternatives and similar repositories for HLA-bind
Users that are interested in HLA-bind are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ERGO is a deep learing based model for predicting TCR-peptide binding.☆18Aug 18, 2022Updated 4 years ago
- ConvMHC - a web server for peptide-MHC class I binding predictions using deep convolutional neural networks☆18Sep 10, 2024Updated last year
- Probabilistic HLA typing☆35Aug 31, 2019Updated 6 years ago
- For MHC-I protein-peptide binding predictions: Deep Learning model with CNN and Snakemake workflow☆13Oct 22, 2018Updated 7 years ago
- Python for HLA analysis: summary, association analysis, zygosity test and interaction test☆37Apr 8, 2026Updated 4 months ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- HLA-I ligand predictor☆47Mar 19, 2026Updated 5 months ago
- A novel PSSM based software for predicting class I peptide-HLA binding affinity☆16Feb 24, 2017Updated 9 years ago
- A sequence-based pan model for peptide-MHC I binding affinity prediction.☆26Apr 25, 2019Updated 7 years ago
- Immunogenetic Data Tools related to HLA, GLStrings, Linkage Disequilibrium☆12Updated this week
- ☆17Mar 22, 2022Updated 4 years ago
- Epitope immunogenicity prediction through in silico TCR-peptide contact potential profiling.☆24Nov 17, 2023Updated 2 years ago
- MHCAttnNet: Allele-Peptide predictions for class I & class II MHC alleles☆30Feb 14, 2021Updated 5 years ago
- Python package and command line tool for epitope prediction☆54Aug 2, 2024Updated 2 years ago
- ☆11Aug 5, 2020Updated 6 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Kourami: Graph-guided assembly for HLA alleles☆42May 21, 2019Updated 7 years ago
- R package – HLA Genotype Imputation with Attribute Bagging (development version only)☆31Aug 19, 2026Updated last week
- STAPLER (Shared TCR And Peptide Language bidirectional Encoder Representations from transformers) is a language model that uses a joint T…☆29Apr 22, 2025Updated last year
- R package implementing a simple method for CD8 T cell epitope prediction by MHC class I binding for HLA and other MHC-I molecules.☆15Sep 21, 2020Updated 5 years ago
- Python interface to running command-line and web-based MHC binding predictors☆103Jul 11, 2026Updated last month
- Peptide-MHC I binding affinity prediction☆273Updated this week
- A Python tool for prediction MHC ligand☆35Feb 10, 2019Updated 7 years ago
- Upload test☆23Jan 1, 2024Updated 2 years ago
- Github for files currently published in the IPD-IMGT/HLA FTP Directory hosted at the European Bioinformatics Institute☆265Updated this week
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Predicting T Cell Receptor Specificity with Deep Learning☆10Jul 17, 2019Updated 7 years ago
- Comparative evaluation of different methods for TCR clustering☆12Aug 28, 2018Updated 8 years ago
- Ranked vaccine peptides for personalized cancer immunotherapy☆63Updated this week
- ☆11Jan 2, 2021Updated 5 years ago
- IMGT segment library converted to RepSeq.IO JSON format☆14Mar 21, 2023Updated 3 years ago
- Personalized cancer epitope discovery and peptide vaccine prediction pipeline☆30Nov 14, 2017Updated 8 years ago
- xHLA: Fast and accurate HLA typing from short read sequence data☆117Oct 13, 2023Updated 2 years ago
- ☆20Sep 25, 2020Updated 5 years ago
- Example Cloud Datalab iPython Notebooks for genomics use cases.☆25Sep 5, 2017Updated 8 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Python-based framework for computational immunomics☆40Jul 7, 2021Updated 5 years ago
- Fast HLA type inference from whole-genome data☆147Apr 3, 2025Updated last year
- VDJ assignment and antibody sequence annotation. Scalable from a single sequence to billions of sequences.☆45Mar 30, 2026Updated 5 months ago
- ImReP is a computational method for rapid and accurate profiling of the adaptive immune repertoire from regular RNA-Seq data.☆29Oct 11, 2019Updated 6 years ago
- PCA and normal mode analysis of proteins☆21May 16, 2024Updated 2 years ago
- 🧛 Deep generative models for TCR sequences 🧛☆17Apr 4, 2022Updated 4 years ago
- Python interface to amino acid properties and IEDB☆57Apr 8, 2026Updated 4 months ago