openvax / vaxrankLinks
Ranked vaccine peptides for personalized cancer immunotherapy
☆59Updated last year
Alternatives and similar repositories for vaxrank
Users that are interested in vaxrank are comparing it to the libraries listed below
Sorting:
- MuPeXI: the mutant peptide extractor and informer, a tool for predicting neo-epitopes from tumor sequencing data.☆52Updated 6 years ago
- Bioinformatics pipeline for selecting patient-specific cancer neoantigen vaccines☆88Updated 3 months ago
- 3D hotspot mutation proximity analysis tool☆50Updated 2 years ago
- Python module for the easy handling and analysis of DNase-seq data☆37Updated 6 years ago
- Flexible Integration of Data with Deep LEarning☆51Updated 2 years ago
- Library for manipulating genomic variants and predicting their effects☆85Updated last year
- Code for the CRISPOR article, all data and code to create figures and analysis☆46Updated 9 years ago
- Predict mutated T-cell epitopes from sequencing data☆30Updated 10 months ago
- Tissue-specific variant effect predictions on splicing☆42Updated 2 years ago
- CADD scripts release for offline scoring. For more information about CADD, please visit our website☆89Updated last month
- Downloader for ENCODE☆32Updated 5 years ago
- Deep-learning Augmented RNA-seq analysis of Transcript Splicing☆115Updated last year
- Annotation of genomic regions using transcription factor binding sites and epigenetic data☆41Updated 3 years ago
- ☆49Updated 3 years ago
- Deep neural networks for predicting CpG methylation☆37Updated 8 years ago
- Python package to annotate and visualize gene fusions.☆65Updated last year
- A quick and flexible single-cell RNA-seq processing framework on the cloud☆39Updated 6 years ago
- ChIP-Atlas: Browse and analyze all public ChIP/DNase-seq data on your browser☆80Updated last week
- ☆42Updated 7 years ago
- A portable, flexible, parallelized tool for complete processing of massively parallel reporter assay data☆35Updated 11 months ago
- Tied Diffusion for Subnetwork Discovery (TieDIE)☆37Updated 4 years ago
- Python biomart API☆69Updated 2 years ago
- A Feature Density Estimator for High-Throughput Sequence Tags☆22Updated 4 years ago
- ChIP-seq DC and QC Pipeline☆36Updated 4 years ago
- Predicting gene expression levels from genomic sequences☆55Updated 5 years ago
- ☆51Updated 2 years ago
- python access to UCSC genomes database☆136Updated 5 years ago
- IPAW: a Nextflow workflow for proteogenomics☆29Updated last year
- predicts neoepitopes from phased somatic mutations detected using tumor/normal DNA-seq data☆27Updated 2 years ago
- OLD REPOSITORY - Go to☆31Updated 7 years ago