Deep-learning empowered prediction and generation of immunogenic epitopes for T cell immunity
☆81Apr 1, 2023Updated 3 years ago
Alternatives and similar repositories for DeepImmuno
Users that are interested in DeepImmuno are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A deep learning approach for predicting high-confidence neoantigens by considering both the presentation possibilities of mutant peptides…☆46Mar 25, 2023Updated 3 years ago
- ERGO-II, an updated version of ERGO including more features for TCR-peptide binding prediction☆36Apr 1, 2022Updated 4 years ago
- PRedictor of IMmunogenic Epitopes☆37Sep 24, 2025Updated last year
- Peptide-MHC I binding affinity prediction☆281Updated this week
- TLimmuno2: predicting MHC class II antigen immunogenicity through transfer learning☆14Jun 19, 2023Updated 3 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- BigMHC predicts MHC-I (neo)epitope presentation and immunogenicity☆70Oct 13, 2026Updated 3 weeks ago
- Splicing Neo Antigen Finder (SNAF) is an easy-to-use Python package to identify splicing-derived tumor neoantigens from RNA sequencing da…☆55Feb 18, 2026Updated 8 months ago
- HLA-I ligand predictor☆48Mar 19, 2026Updated 7 months ago
- Seq2Neo: a comprehensive pipeline for cancer neoantigen immunogenicity prediction☆23Feb 17, 2023Updated 3 years ago
- Predicting immunogenic peptide recognized by TCR through ensemble deep learning☆18Apr 22, 2024Updated 2 years ago
- Matching T-cell receptor repertoires to a database of antigen specificities☆40Updated this week
- ☆22Jun 10, 2024Updated 2 years ago
- Parsing MHC nomenclature in the wild☆21Updated this week
- Deep Learning the T Cell Receptor Binding Specificity of Neoantigen☆93Jun 14, 2022Updated 4 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- A computational workflow for exitron splicing identification☆16Jul 17, 2026Updated 3 months ago
- TEIM: TCR-Epitope Interaction Modeling☆60Jul 26, 2023Updated 3 years ago
- R package to BLAST peptide sequences against each other and identify the minimal overlap of aligning regions.☆17Aug 26, 2025Updated last year
- ☆13Aug 14, 2020Updated 6 years ago
- Priorization of neoantigens by machine learning☆14Dec 7, 2023Updated 2 years ago
- a tool for annotation of immunoglobulin genes in genome assemblies☆15Sep 22, 2025Updated last year
- R package implementing a simple method for CD8 T cell epitope prediction by MHC class I binding for HLA and other MHC-I molecules.☆16Sep 21, 2020Updated 6 years ago
- Methods to predict antibody immunogenicity☆18Aug 21, 2025Updated last year
- Python package and command line tool for epitope prediction☆55Aug 2, 2024Updated 2 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- BioPhi is an open-source antibody design platform. It features methods for automated antibody humanization (Sapiens), humanness evaluatio…☆269May 13, 2025Updated last year
- Fast, gene-specific joint humanisation of antibody heavy and light chains.☆27Oct 30, 2026Updated last week
- ☆52Mar 30, 2026Updated 7 months ago
- Antibody Numbering and Antigen Receptor ClassIfication☆299May 21, 2024Updated 2 years ago
- ☆14Nov 3, 2021Updated 5 years ago
- open source repository☆149Nov 30, 2023Updated 2 years ago
- Deep learning framework for protein sequence design from a backbone scaffold that can leverage the molecular context including non-protei…☆51Nov 4, 2025Updated last year
- A context aware tool for proteasomal cleavage predictions☆17Jul 17, 2026Updated 3 months ago
- Code for NeurIPS 2024 paper "A SARS-CoV-2 Interaction Dataset and VHH Sequence Corpus for Antibody Language Models"☆18Oct 17, 2024Updated 2 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- DeepNovo workflow of neoantigen discovery by personalized de novo sequencing.☆12Nov 26, 2020Updated 5 years ago
- DeepViscosity is a deep learning ANN model developed to predict high concentrated monoclonal antibody viscosity classes (Low <= 20cps, Hi…☆29Feb 23, 2026Updated 8 months ago
- The official repository for TherML - a machine learning approach to predict scFv and antibody thermostability☆16Sep 8, 2023Updated 3 years ago
- ☆18Jun 24, 2024Updated 2 years ago
- HLA-II ligand predictor.☆53Aug 25, 2026Updated 2 months ago
- Predict the structure of immune receptor proteins☆196Oct 30, 2026Updated last week
- Large language modeling applied to T-cell receptor (TCR) sequences.☆61May 4, 2022Updated 4 years ago