michaelkyu / MobMessLinks
☆21Updated 3 years ago
Alternatives and similar repositories for MobMess
Users that are interested in MobMess are comparing it to the libraries listed below
Sorting:
- PlasX, a machine learning classifier for identifying plasmid sequences based on genetic architecture☆38Updated 3 years ago
- Database and pipeline for protein structure-guided annotations of ecologically relevant functions at the metagenome scale.☆23Updated 2 weeks ago
- Downstream processing of VAMB binning for Viral Elucidation☆50Updated last year
- Python script to upload bins and MAGs to ENA (European Nucleotide Archive)☆25Updated this week
- Prophage Activity Estimator☆27Updated last year
- ☆16Updated 4 months ago
- A workflow and scripts for large-scale antiSMASH analyses☆42Updated 6 months ago
- Eukfinder: A pipeline to retrieve microbial eukaryote genomes from metagenomic sequencing data☆27Updated 5 months ago
- ☆26Updated 2 years ago
- HOTSPOT is a hierarchical host prediction tool for plasmid contigs using Transformer.☆10Updated last year
- Population genomics from metagenomes☆12Updated last year
- Identify and remove contaminants from metagenome-assembled genomes☆18Updated last year
- Fast and sensitive discovery of complete phages and prophages in bacterial genome sequences☆21Updated 9 months ago
- ☆33Updated last year
- lsaBGC - Lineage Specific Analysis of Biosynthetic Gene Clusters☆37Updated last week
- Prophage Tracer: precisely tracing prophages in prokaryotic genomes using overlapping split-read alignment☆24Updated 11 months ago
- Gupta et al., TaxiBGC: a Taxonomy-guided Approach for Profiling Experimentally Characterized Microbial Biosynthetic Gene Clusters and Sec…☆16Updated 2 years ago
- Classify metagenomic contigs as eukaryotic or prokaryotic☆41Updated 2 years ago
- MDMcleaner the assessment, classification and refinement tool for microbial dark matter SAGs and MAGs☆23Updated 2 years ago
- Workflow to assign Taxonomy to a bacteriophage genome isolate☆34Updated 6 months ago
- KEGG Module Evaluation Tool☆31Updated last year
- Find Prokaryotic DNA methylase genes in proteins, contigs, or genomes☆11Updated last year
- SCAPP is a plasmid assembly tool. This tool is described in our paper: https://microbiomejournal.biomedcentral.com/articles/10.1186/s4016…☆34Updated 2 years ago
- A Hierarchical Approach to Pangenomics Inference☆11Updated last year
- ☆20Updated 2 years ago
- ☆13Updated last year
- EzAAI - High Throughput Prokaryotic AAI Calculator☆44Updated 2 months ago
- Hydrocarbon biodegradation gene annotation☆18Updated 3 years ago
- ☆31Updated 7 months ago
- BinaRena: Interactive Visualization and Binning of Metagenomic Contigs☆32Updated last year