michaelkyu / MobMessLinks
☆22Updated 3 years ago
Alternatives and similar repositories for MobMess
Users that are interested in MobMess are comparing it to the libraries listed below
Sorting:
- PlasX, a machine learning classifier for identifying plasmid sequences based on genetic architecture☆40Updated 3 years ago
- Downstream processing of VAMB binning for Viral Elucidation☆53Updated last year
- Python script to upload bins and MAGs to ENA (European Nucleotide Archive)☆25Updated last month
- Prophage Activity Estimator☆30Updated last year
- Eukfinder: A pipeline to retrieve microbial eukaryote genomes from metagenomic sequencing data☆28Updated 8 months ago
- ☆16Updated 8 months ago
- Database and pipeline for protein structure-guided annotations of ecologically relevant functions at the metagenome scale.☆24Updated 2 months ago
- A workflow and scripts for large-scale antiSMASH analyses☆46Updated 9 months ago
- HOTSPOT is a hierarchical host prediction tool for plasmid contigs using Transformer.☆10Updated last year
- Prophage Tracer: precisely tracing prophages in prokaryotic genomes using overlapping split-read alignment☆24Updated last year
- Fast and sensitive discovery of complete phages and prophages in bacterial genome sequences☆22Updated last year
- ☆26Updated 2 years ago
- Gupta et al., TaxiBGC: a Taxonomy-guided Approach for Profiling Experimentally Characterized Microbial Biosynthetic Gene Clusters and Sec…☆15Updated 2 years ago
- Protocol for finding informative protein families and then using them to score omic samples☆18Updated 3 years ago
- KEGG Module Evaluation Tool☆32Updated 2 years ago
- Hydrocarbon biodegradation gene annotation☆18Updated 3 years ago
- ☆33Updated 2 years ago
- EzAAI - High Throughput Prokaryotic AAI Calculator☆45Updated 5 months ago
- This is a repository for CAMPER.☆16Updated last year
- Identify and remove contaminants from metagenome-assembled genomes☆18Updated last year
- Binnacle: Using Scaffolds to Improve the Contiguity and Quality of Metagenomic Bins☆15Updated 4 years ago
- lsaBGC - Lineage Specific Analysis of Biosynthetic Gene Clusters☆40Updated 3 months ago
- Population genomics from metagenomes☆12Updated last year
- ☆33Updated 3 months ago
- Workflow to assign Taxonomy to a bacteriophage genome isolate☆36Updated 9 months ago
- Classify metagenomic contigs as eukaryotic or prokaryotic☆43Updated 2 years ago
- BinaRena: Interactive Visualization and Binning of Metagenomic Contigs☆33Updated last year
- MDMcleaner the assessment, classification and refinement tool for microbial dark matter SAGs and MAGs☆23Updated 2 years ago
- Meteor is a plateform for quantitative metagenomics profiling of complex ecosystems. Meteor relies on genes catalogue to perform species-…☆33Updated 3 weeks ago
- ☆14Updated 2 years ago