☆21Mar 15, 2023Updated 3 years ago
Alternatives and similar repositories for mEQO
Users that are interested in mEQO are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Tools for extracting individual genomes from metagenomes☆16Dec 4, 2023Updated 2 years ago
- ☆27Jun 20, 2023Updated 3 years ago
- Tool for constructing phylogenies and summarizing metabolic characteristics based on curated and custom profile HMMs☆19Feb 5, 2022Updated 4 years ago
- Bioinformatics program inStrain☆191Mar 12, 2026Updated 4 months ago
- Accurate and robust inference of microbial growth dynamics from metagenomic sequencing☆20May 11, 2022Updated 4 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- microbiome data simulation package☆22Oct 2, 2025Updated 9 months ago
- ☆24Feb 7, 2022Updated 4 years ago
- A tool to assemble high-quality phages from metagenomes.☆22May 22, 2026Updated 2 months ago
- A Reference Pathways Mapper for turning metagenomic functional profiles into pathway/module profiles.☆27Nov 21, 2018Updated 7 years ago
- zol (& fai): large-scale targeted detection and evolutionary investigation of gene clusters (i.e. BGCs, phages, etc.)☆72Jul 16, 2026Updated last week
- A platform for targeted annotation of (meta)genomic and (meta)transcriptomic datasets using HMM sets.☆18Apr 4, 2026Updated 3 months ago
- ☆17Updated this week
- ☆11Mar 29, 2025Updated last year
- MacSyFinder models allowing for a systematic search of anti-phage systems☆25May 14, 2026Updated 2 months ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Tools to analyze the differences and similarities between CRISPR arrays☆11Dec 17, 2024Updated last year
- ☆65Feb 27, 2024Updated 2 years ago
- Pathway-based and phylogenetically adjusted quantification of competition and cooperation between microbial species☆19Mar 17, 2021Updated 5 years ago
- This is a repository for CAMPER.☆17Mar 18, 2024Updated 2 years ago
- A command-line tool for profiling CAZyme abundances in metagenomic datasets.☆41Updated this week
- Public repository for cFMD - curatedFoodMetagenomicData☆37Jun 18, 2026Updated last month
- Scripts used in the publication Tyler P. Barnum, Israel A. Figueroa, Charlotte I. Carlström, Lauren N. Lucas, Anna L. Engelbrektson, and …☆10Jun 19, 2019Updated 7 years ago
- Find Prokaryotic DNA methylase genes in proteins, contigs, or genomes☆13Jan 23, 2026Updated 6 months ago
- Identifying misassemblies via deep learning☆11May 1, 2024Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- This is a comprehensive database for fast and accurately analyzing the phosphorus cycling genes.☆37Jul 12, 2022Updated 4 years ago
- Pipeline for identification of eukaryotic contigs in metagenomic assemblies☆13Mar 14, 2024Updated 2 years ago
- Functions to manipulate and visualize microbial community data☆12Sep 15, 2023Updated 2 years ago
- ☆36Jan 21, 2026Updated 6 months ago
- ☆42Mar 26, 2025Updated last year
- A Hierarchical Approach to Pangenomics Inference☆13Apr 15, 2024Updated 2 years ago
- Prediction of microbial interactions in complex communities☆14Aug 14, 2024Updated last year
- MAGinator - Accurate SNV calling and profiling of MAGs☆28Mar 23, 2026Updated 4 months ago
- Pathway Tools multiprocessing wrapper (for PathoLogic).☆16Dec 18, 2025Updated 7 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- A repo to reproduce the experiments in the YACHT manuscript☆12Nov 2, 2023Updated 2 years ago
- The construction of reference gene catalog and metagenome-assembled genomes of pig gut microbiome.☆30Jul 21, 2022Updated 4 years ago
- aweMAGs: a fully automated workflow for eukariotic MAGs☆23Jun 6, 2023Updated 3 years ago
- Protocol for finding informative protein families and then using them to score omic samples☆19Jul 27, 2022Updated 4 years ago
- Bin Chicken - recovery of low abundance and taxonomically targeted metagenome assembled genomes (MAGs) through strategic coassembly☆77Updated this week
- Python package simulating artificial selection on microbial communities☆15Aug 15, 2023Updated 2 years ago
- Tool to help visualize data after BLAST by generating pathways on KEGG using an input file of genes and their associated KEGG accession.☆10Apr 29, 2022Updated 4 years ago