Xiaoyu2425 / mEQOLinks
☆15Updated 2 years ago
Alternatives and similar repositories for mEQO
Users that are interested in mEQO are comparing it to the libraries listed below
Sorting:
- Tool for constructing phylogenies and summarizing metabolic characteristics based on curated and custom profile HMMs☆18Updated 3 years ago
- This is a comprehensive database for fast and accurately analyzing the phosphorus cycling genes.☆31Updated 2 years ago
- ☆25Updated last year
- http://huttenhower.sph.harvard.edu/waafle☆16Updated 5 months ago
- Plot microbiome time series in parallel☆26Updated last year
- ☆13Updated last year
- scripts for microbiome analysis☆11Updated 10 months ago
- A functional profiler for metagenomes using FracMinHash☆16Updated 3 months ago
- CroCoDeEL is a tool that detects cross-sample contamination in shotgun metagenomic data☆24Updated 2 weeks ago
- Fast and accurate Average Genome Size and 16S rRNA gene Average Copy Number computation in metagenomic data☆14Updated 5 months ago
- Protocol for finding informative protein families and then using them to score omic samples☆18Updated 2 years ago
- Tools for extracting individual genomes from metagenomes☆17Updated last year
- ☆21Updated 4 months ago
- Ready-to-use pipeline to detect, count and identify the hgcAB genes, involved in mercury methylation, from metagenomes☆10Updated last year
- ☆10Updated 4 years ago
- MAG Circularization Method☆33Updated 3 years ago
- A machine learning-based tool for predicting metabolic modules in incomplete bacterial genomes.☆18Updated 7 months ago
- Antibiotic resistance genes (ARGs) have accelerated microbial threats to human health during the last decade. Here we determined the risk…☆16Updated 3 years ago
- ☆17Updated 6 months ago
- ☆16Updated 3 weeks ago
- R package for microbial pangenomics☆23Updated 3 years ago
- Structural and functional annotation of eukaryotic metagenome-assembled genomes☆22Updated 2 years ago
- MetaSNV, a metagenomic SNV calling pipeline.☆20Updated 3 years ago
- Phylogenetic Organization of Metagenomic Signals (POMS)☆19Updated 2 years ago
- SynTracker is a pipeline, designated to determine the biological relatedness of conspecific strains (microbial strains of the same specie…☆31Updated 4 months ago
- Working with the outputs of sourmash in R☆27Updated last year
- MAGScoT - a MAG scoring and refinement tool☆35Updated 7 months ago
- dada2 formatted nifH database☆11Updated last year
- Improvement of metagenome-assembled genomes☆52Updated 5 years ago
- Protocol for finding informative protein families and then using them to score metagenomic sets.☆9Updated 3 years ago