Xiaoyu2425 / mEQOLinks
☆17Updated 2 years ago
Alternatives and similar repositories for mEQO
Users that are interested in mEQO are comparing it to the libraries listed below
Sorting:
- Tool for constructing phylogenies and summarizing metabolic characteristics based on curated and custom profile HMMs☆17Updated 3 years ago
- http://huttenhower.sph.harvard.edu/waafle☆20Updated 9 months ago
- Phylogenetic Organization of Metagenomic Signals (POMS)☆18Updated 2 years ago
- A machine learning-based tool for predicting metabolic modules in incomplete bacterial genomes.☆20Updated last month
- ☆27Updated 7 months ago
- ☆26Updated 2 years ago
- Ready-to-use pipeline to detect, count and identify the hgcAB genes, involved in mercury methylation, from metagenomes☆10Updated last year
- ☆13Updated last year
- CroCoDeEL is a tool that detects cross-sample contamination in shotgun metagenomic data☆24Updated last month
- Protocol for finding informative protein families and then using them to score omic samples☆18Updated 3 years ago
- ☆17Updated 10 months ago
- MAGinator - Accurate SNV calling and profiling of MAGs☆23Updated 4 months ago
- scripts for microbiome analysis☆11Updated last year
- MAG Circularization Method☆32Updated 3 years ago
- Plot microbiome time series in parallel☆26Updated last year
- This is a comprehensive database for fast and accurately analyzing the phosphorus cycling genes.☆31Updated 3 years ago
- Growth Rate Index (GRiD) measures bacterial growth rate from reference genomes (including draft quality genomes) and metagenomic bins at …☆31Updated 5 years ago
- MiCoP is a method for high-accuracy profiling of viral and fungal metagenomic communities.☆15Updated 3 years ago
- ☆13Updated 8 years ago
- KEGG Module Evaluation Tool☆31Updated last year
- ☆11Updated last year
- A functional profiler for metagenomes using FracMinHash☆16Updated 2 months ago
- A platform for targeted annotation of (meta)genomic and (meta)transcriptomic datasets using HMM sets.☆14Updated last year
- Fast and accurate Average Genome Size and 16S rRNA gene Average Copy Number computation in metagenomic data☆13Updated 9 months ago
- MAGScoT - a MAG scoring and refinement tool☆36Updated 11 months ago
- zol (& fai): large-scale targeted detection and evolutionary investigation of gene clusters (i.e. BGCs, phages, etc.)☆62Updated this week
- Fast and sensitive discovery of complete phages and prophages in bacterial genome sequences☆21Updated 9 months ago
- Antibiotic resistance genes (ARGs) have accelerated microbial threats to human health during the last decade. Here we determined the risk…☆19Updated 3 years ago
- ☆18Updated 3 years ago
- Tools for extracting individual genomes from metagenomes☆16Updated last year