A wrapper to identify, bin, classify, and predict host-viral relationship for viruses
☆89Dec 27, 2024Updated last year
Alternatives and similar repositories for ViWrap
Users that are interested in ViWrap are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Binning Virus Genomes from Metagenomes☆73Jul 13, 2022Updated 3 years ago
- Pipeline for identification of eukaryotic contigs in metagenomic assemblies☆13Mar 14, 2024Updated 2 years ago
- A tool to raise the quality of viral genomes assembled from short-read metagenomes via resolving and joining of contigs fragmented during…☆82Sep 8, 2025Updated 7 months ago
- ☆25Jun 20, 2023Updated 2 years ago
- geNomad: Identification of mobile genetic elements☆303Mar 29, 2026Updated last month
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- A containerized bioinformatics pipeline for viral metagenomic data analysis☆38Apr 9, 2026Updated 2 weeks ago
- VIRify: detection of phages and eukaryotic viruses from metagenomic and metatranscriptomic assemblies☆148Apr 21, 2026Updated last week
- a command line tool for viral proteomic tree generation, part of the ViPTree project: http://www.genome.jp/viptree☆36Sep 20, 2022Updated 3 years ago
- A pipeline for the macro- and micro-diversity analyses and visualization of metagenomic-derived populations☆44Apr 4, 2023Updated 3 years ago
- Discover and annotate the virome☆63Feb 11, 2026Updated 2 months ago
- customizable pipeline to identify viral sequences from (meta)genomic data☆288Nov 28, 2024Updated last year
- Virus Identification By iteRative ANnoTation☆194Apr 15, 2024Updated 2 years ago
- The viral taxonomic assignment pipeline☆43Apr 16, 2026Updated last week
- ☆38Dec 6, 2023Updated 2 years ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- Trans-Kingdom Marker Gene Pipeline for Taxonomic Profiling of Human Metagenomes☆23Nov 24, 2025Updated 5 months ago
- ☆58Apr 8, 2026Updated 3 weeks ago
- VirBot: a protein-based RNA virus detector for metagenomic data☆34Jul 29, 2024Updated last year
- Nature Communications | BASALT (Binning Across a Series of Assemblies Toolkit) for binning and refinement of short- and long-read sequenc…☆129Apr 19, 2026Updated last week
- Classify metagenomic contigs as eukaryotic or prokaryotic☆45Feb 17, 2023Updated 3 years ago
- A scalable high-throughput metabolic and biogeochemical functional trait profiler☆225Mar 24, 2026Updated last month
- Downstream processing of VAMB binning for Viral Elucidation☆55Jul 3, 2024Updated last year
- Distilled and Refined Annotation of Metabolism: A tool for the annotation and curation of function for microbial and viral genomes☆332Apr 20, 2026Updated last week
- Virus Protein Family tools☆31Jul 20, 2022Updated 3 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- Improvement of metagenome-assembled genomes☆57Mar 17, 2020Updated 6 years ago
- Workflow to rapidly quantify taxa from all domains of life, directly from short-read human gut metagenomes☆72Dec 1, 2025Updated 4 months ago
- A Hierarchical Approach to Pangenomics Inference☆13Apr 15, 2024Updated 2 years ago
- MetaGeneMark-2: Improved Gene Prediction in Metagenomes☆23Mar 20, 2026Updated last month
- CAT/BAT/RAT: tools for taxonomic classification of contigs and metagenome-assembled genomes (MAGs) and for taxonomic profiling of metage…☆229Apr 1, 2026Updated 3 weeks ago
- Fast and sensitive discovery of complete phages and prophages in bacterial genome sequences☆22Dec 16, 2024Updated last year
- Identify and remove contaminants from metagenome-assembled genomes☆18Feb 16, 2024Updated 2 years ago
- BinaRena: Interactive Visualization and Binning of Metagenomic Contigs☆33Aug 22, 2024Updated last year
- Read alignment statistics for metagenomics☆396Apr 8, 2026Updated 3 weeks ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Variational autoencoder for metagenomic binning☆322Updated this week
- Pipeline for metagenomic community analysis using DNA isolated from virus-like particles☆13Mar 21, 2020Updated 6 years ago
- Hydrocarbon biodegradation gene annotation☆19Jul 14, 2022Updated 3 years ago
- Assessing the quality of metagenome-derived genome bins using machine learning☆254Mar 20, 2025Updated last year
- Scalable creating/updating of metagenome profiling databases☆62Jun 25, 2025Updated 10 months ago
- ☆49Mar 13, 2024Updated 2 years ago
- Toolbox for comparative genomics of MAGs☆90Mar 25, 2026Updated last month