functional-dark-side / agnostos-wf
☆44Updated last year
Alternatives and similar repositories for agnostos-wf:
Users that are interested in agnostos-wf are comparing it to the libraries listed below
- Improvement of metagenome-assembled genomes☆51Updated 4 years ago
- ☆24Updated 6 years ago
- Prophage Activity Estimator☆26Updated 8 months ago
- Bacterial GWAS analysis☆36Updated 2 months ago
- Melon: metagenomic long-read-based taxonomic identification and quantification using marker genes☆34Updated 3 weeks ago
- SCAPP is a plasmid assembly tool. This tool is described in our paper: https://microbiomejournal.biomedcentral.com/articles/10.1186/s4016…☆31Updated last year
- Automatic eukaryotic taxonomic classification☆28Updated 4 months ago
- Ley Lab MetaGenome Profiler DataBase generator☆49Updated 2 years ago
- zol (& fai): large-scale targeted detection and evolutionary investigation of gene clusters (i.e. BGCs, phages, etc.)☆53Updated this week
- ☆48Updated 10 months ago
- Estimate metagenomic coverage and sequence diversity☆48Updated 6 months ago
- Phylogeny Enhanded Prediction of PAN-genome☆40Updated 4 years ago
- A python library for predicting phage lifestyle based on genome sequence☆35Updated last year
- IslandPath standalone software☆31Updated last year
- Gene-flank analysis tool☆27Updated last month
- MAG Circularization Method☆33Updated 2 years ago
- Identify phage regions in bacterial genomes for masking purposes☆30Updated 5 years ago
- MicrobeCensus estimates the average genome size of microbial communities from metagenomic data☆43Updated 4 years ago
- ☆62Updated last month
- lsaBGC - Lineage Specific Analysis of Biosynthetic Gene Clusters☆37Updated 6 months ago
- KEGG Module Evaluation Tool☆28Updated last year
- Tool to estimate genome quality of microbial eukaryotes☆36Updated 2 weeks ago
- Downstream processing of VAMB binning for Viral Elucidation☆47Updated 7 months ago
- Gene Absence Presence Identification tool.☆26Updated last year
- Predicting plasmid contigs from assemblies using single copy marker genes, plasmid genes, kmers - Developed by Linda van der Graaf☆48Updated 10 months ago
- Pipeline for Reproducible and Scalable Integration of Metagenomic and Metatranscriptomic Data☆14Updated 2 weeks ago
- Scalable creating/updating of metagenome profiling databases☆60Updated 2 years ago
- Structural and functional annotation of eukaryotic metagenome-assembled genomes☆21Updated last year
- SynTracker is a pipeline, designated to determine the biological relatedness of conspecific strains (microbial strains of the same specie…☆26Updated last week
- EzAAI - High Throughput Prokaryotic AAI Calculator☆38Updated 4 months ago