SynVisio is an interactive multiscale visualization tool that lets you explore the results of McScanX a popular synteny and collinearity detection toolkit.
☆94May 6, 2026Updated this week
Alternatives and similar repositories for synvisio
Users that are interested in synvisio are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- MCScanX: Multiple Collinearity Scan toolkit X version. The most popular synteny analysis tool in the world!☆285Oct 4, 2025Updated 7 months ago
- TOGA (Tool to infer Orthologs from Genome Alignments): implements a novel paradigm to infer orthologous genes. TOGA integrates gene annot…☆205Nov 23, 2025Updated 5 months ago
- k-mer based assembly evaluation☆343Jun 28, 2024Updated last year
- Extensive de-novo TE Annotator☆443Apr 5, 2026Updated last month
- Long-reads Gap-free Chromosome-scale Assembler☆79Mar 21, 2023Updated 3 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- An R package to detect, classify, and visualize genome rearrangements☆15Aug 4, 2020Updated 5 years ago
- An R package to infer and analyze synteny networks from protein sequences☆38Jul 23, 2025Updated 9 months ago
- Genome alignment and synteny plots☆34Mar 24, 2026Updated last month
- Python library to facilitate genome assembly, annotation, and comparative genomics☆903May 2, 2026Updated last week
- defusion☆14Aug 24, 2021Updated 4 years ago
- Robust identification of orthologous Synteny with the Orthology Index☆42Updated this week
- Neural network classification of TE☆99Apr 3, 2026Updated last month
- methods for orphan gene prediction paper optimization☆25Dec 24, 2021Updated 4 years ago
- Generate an interactive dot plot from mummer or minimap alignments