wjidea / defusionLinks
defusion
☆14Updated 3 years ago
Alternatives and similar repositories for defusion
Users that are interested in defusion are comparing it to the libraries listed below
Sorting:
- A program to generate a graph which presents a simplified representation of several full length genomes☆13Updated 6 years ago
- PanEffect is a JavaScript framework to explore variant effects across a pangenome. The tool has two views that allows a user to (1) expl…☆13Updated last year
- parallelLastz: Running Lastz in parallel☆16Updated 8 months ago
- A loose collection of scripts and utilities for processing and analyzing the Goat reference genome assembly☆11Updated 8 years ago
- An R package for comparative transcriptomic analyses of hybrids and their progenitors☆14Updated 9 months ago
- Gene copy number prediction from k-mer frequencies☆13Updated 10 months ago
- Nucmer from Mummer3 followed by ggplot for nicer and more customisable genome alignment plots.☆11Updated 4 years ago
- Identification of conserved non-coding sequences in plants☆17Updated last month
- Pipeline for genome scaffolding by modelling distributions of HiC pairs☆9Updated 2 years ago
- Efficient indexing and querying of annotations in a pangenome graph☆9Updated 7 months ago
- ☆15Updated 4 years ago
- Invertory of TE-gene isoforms☆11Updated last year
- Consensus genome annotation using OMA☆24Updated last month
- Scripts to do haplotype analysis on pan genomes.☆21Updated 4 years ago
- Tandem Repeats Finder: a program to analyze DNA sequences☆15Updated 2 years ago
- Scripts to split reference and run mummer in parallel on an SGE cluster☆11Updated 8 years ago
- Kmer based genotyper for short reads.☆23Updated 3 years ago
- A framework for extracting telomeric reads from single-molecule sequencing experiments, describing their sequence variation and motifs, a…☆16Updated last year
- ☆12Updated last year
- HAT is a set of tools for calling de novo variants from whole-genome sequencing data.☆23Updated last year
- SINE annotation tool for plant genomes☆17Updated last year
- Simple tools for working with Hi-C data☆18Updated 6 years ago
- Prefix-renaming FASTA records really fast.☆17Updated 11 months ago
- Population-scale detection of non-reference sequence variants using colored de Bruijn Graphs☆24Updated last year
- Convert RepeatMasker ".out" file into a gff3 with colors!!!☆21Updated 4 years ago
- ☆12Updated 4 years ago
- Phasing reads with secondary alignments☆18Updated 6 months ago
- The MafFilter genome alignment processor☆18Updated 3 weeks ago
- ☆16Updated this week
- HaploSweep is a method for detecting and categorizing soft and hard selective sweeps based on haplotype structure.☆10Updated 8 months ago