wjidea / defusion
defusion
☆14Updated 3 years ago
Alternatives and similar repositories for defusion:
Users that are interested in defusion are comparing it to the libraries listed below
- A program to generate a graph which presents a simplified representation of several full length genomes☆12Updated 6 years ago
- HAT is a set of tools for calling de novo variants from whole-genome sequencing data.☆23Updated last year
- A loose collection of scripts and utilities for processing and analyzing the Goat reference genome assembly☆11Updated 8 years ago
- Nucmer from Mummer3 followed by ggplot for nicer and more customisable genome alignment plots.☆11Updated 4 years ago
- Tandem Repeats Finder: a program to analyze DNA sequences☆14Updated 2 years ago
- De-novo Assembly Structural Variant Caller☆13Updated 8 years ago
- parallelLastz: Running Lastz in parallel☆15Updated 6 months ago
- Scripts to do haplotype analysis on pan genomes.☆21Updated 4 years ago
- Kmer based genotyper for short reads.☆23Updated 3 years ago
- An R package for comparative transcriptomic analyses of hybrids and their progenitors☆14Updated 6 months ago
- Consensus genome annotation using OMA☆22Updated 3 months ago
- A framework for extracting telomeric reads from single-molecule sequencing experiments, describing their sequence variation and motifs, a…☆16Updated last year
- transposable element typing pipeline☆17Updated last year
- SINE annotation tool for plant genomes☆17Updated last year
- Simultaneous multi-sample transcript assembler for RNA-seq data☆17Updated 3 months ago
- ☆15Updated 3 years ago
- Gene copy number prediction from k-mer frequencies☆12Updated 8 months ago
- ☆12Updated 4 years ago
- Simple tools for working with Hi-C data☆17Updated 6 years ago
- ☆10Updated 4 years ago
- Phasing reads with secondary alignments☆17Updated 4 months ago
- A comparative genome scaffolding tool☆17Updated 6 years ago
- Set of script for the paper on the cattle graph genome☆13Updated 2 years ago
- Pipeline for genome scaffolding by modelling distributions of HiC pairs☆10Updated 2 years ago
- Archived version 1.0.2☆16Updated 5 years ago
- Genotyping of segregating mobile elements insertions☆19Updated 3 years ago
- Functions to compare a SV call sets against a truth set.☆29Updated 11 months ago
- Scripts to split reference and run mummer in parallel on an SGE cluster☆11Updated 8 years ago
- A reliable gap filling pipeline for draft genomes☆11Updated 5 years ago
- Population-scale detection of non-reference sequence variants using colored de Bruijn Graphs☆24Updated 11 months ago