tolkit / telomeric-identifierLinks
Identify and find telomeres, or telomeric repeats in a genome.
☆154Updated last month
Alternatives and similar repositories for telomeric-identifier
Users that are interested in telomeric-identifier are comparing it to the libraries listed below
Sorting:
- Structural Variant Identification Method using Genome Assemblies☆129Updated 3 years ago
- Find, circularise and annotate mitogenome from PacBio assemblies☆189Updated 7 months ago
- TEsorter: an accurate and fast method to classify LTR-retrotransposons in plant genomes☆101Updated last month
- TEtrimmer: a novel tool to automate manual curation of transposable elements☆109Updated 3 weeks ago
- A single fast and exhaustive tool for summary statistics and simultaneous *fa* (fasta, fastq, gfa [.gz]) genome assembly file manipulatio…☆120Updated 6 months ago
- MitoFinder: efficient automated large-scale extraction of mitogenomic data from high throughput sequencing data☆111Updated 3 months ago
- Reference-free profiling of polyploid genomes☆137Updated 2 months ago
- High-precision TE Annotator☆145Updated 3 weeks ago
- A genome completeness evaluation tool based on miniprot☆230Updated 3 months ago
- Yet another k-mer analyzer☆153Updated this week
- Mapping pipeline for data generated using Arima-HiC☆81Updated last year
- Nanopore data assembler☆162Updated 3 years ago
- ☆176Updated 2 months ago
- RaGOO is no longer supported. Please use RagTag instead: https://github.com/malonge/RagTag☆174Updated 4 years ago
- Version 5 of the CAFE phylogenetics software☆158Updated 10 months ago
- source code for EVM☆119Updated last year
- Constructing a pangenome gene graph☆201Updated 4 months ago
- ☆144Updated last month
- A telomere-to-telomere toolkit for gap-free genome assembly and centromeric repeat identification☆158Updated 2 months ago
- A list of software for pangenomics☆165Updated 2 weeks ago
- Make colorful identity heatmaps of genomic sequence☆128Updated last year
- Get assembly statistics from FASTA and FASTQ files☆124Updated 2 years ago
- A *fast* tool for BAM/CRAM quality evaluation, intended for long reads☆163Updated this week
- Remove CCS reads with remnant PacBio adapter sequences and convert outputs to a compressed .fastq (.fastq.gz).☆99Updated last year
- GALBA is a pipeline for fully automated prediction of protein coding gene structures with AUGUSTUS in novel eukaryotic genomes for the sc…☆147Updated 11 months ago
- Sensitive alignment of genomes with high sequence diversity, extensive structural polymorphism and whole-genome duplication variation☆183Updated 2 months ago
- Collection of tools for the analysis of CpG data☆102Updated 5 months ago
- Evaluating genome assemblies☆110Updated 3 months ago
- Panacus is a tool for computing statistics for GFA-formatted pangenome graphs☆116Updated 3 weeks ago
- Few scripts facilitating the extraction of info from Repeat Masker .out files☆85Updated 4 years ago