dorolin / rearrvisrLinks
An R package to detect, classify, and visualize genome rearrangements
☆14Updated 4 years ago
Alternatives and similar repositories for rearrvisr
Users that are interested in rearrvisr are comparing it to the libraries listed below
Sorting:
- New version of mpMap☆12Updated 4 years ago
- Performing highly efficient genome scans for local adaptation with R package pcadapt v4☆41Updated 9 months ago
- Code for the Brassica oleracea/rapa/napus genomic comparison☆16Updated 4 years ago
- Minimal Assumption Genomic Inference of Coalescence☆14Updated last year
- SeqWho - A reliable and rapid FASTQ(A) file classifier☆11Updated 3 years ago
- R Package for performing Qst-Fst analyses☆21Updated 7 years ago
- Tao Yan's Plot Toolkit☆12Updated 5 years ago
- ☆12Updated 2 months ago
- Using ggtree to Visualize Data on Tree-Like Structure☆24Updated 5 years ago
- ☆9Updated 2 years ago
- Suite of tools for pangenomics built using vg☆23Updated last week
- ☆17Updated 3 weeks ago
- Calculate genome wide average nucleotide identity (gwANI) for a multiFASTA alignment☆16Updated 6 years ago
- This is the GPress, a framework for querying GTF, GFF3 and expression files in a compressed form.☆12Updated last year
- ☆16Updated 7 years ago
- All JBrowse plugins created by Brigitte Hofmeister☆10Updated 7 years ago
- Collection of simple C scripts for parsing vcf or bam files using the htslib C library. These scripts can be used as the starting point f…☆11Updated 4 years ago
- A smorgasbord of R functions for population genomic analyses☆18Updated this week
- ☆15Updated 7 years ago
- Indel-aware consensus for aligned BAM☆21Updated 3 months ago
- Genome assembly quality improvement assisted by alternative assemblies and paired-end Illumina reads☆7Updated 6 years ago
- Teaching modules for Human Genome Variation Lab.☆20Updated last month
- SNP genotyping in polyploids☆17Updated 4 years ago
- an R package for admixture analyses☆17Updated 10 years ago
- An R package to perform systematic quality checks on comparative genomics analyses☆11Updated last year
- ☆9Updated 4 years ago
- Bayesian Multi-Trait Multi-Environment for genomic selection[R package] [Dev version]☆19Updated last year
- The fastest VCF/BCF parser in R https://doi.org/10.1093/bioinformatics/btae049☆15Updated 2 weeks ago
- ☆19Updated last year
- Population-scale detection of non-reference sequence variants using colored de Bruijn Graphs☆24Updated last year