eswlab / orphan-prediction

Related projects: ⓘ

• sanger-tol / yahs
  Yet another Hi-C scaffolding tool
  ☆19Updated last year
• schneebergerlab / AMPRIL-genomes
  scripts for the project of seven thaliana genomes assembly
  ☆35Updated 3 years ago
• Nextomics / pipeline-for-isoseq
  A pipeline for isoseq
  ☆23Updated 6 years ago
• hahnlab / CAGEE
  Computational Analysis of Gene Expression Evolution
  ☆34Updated this week
• HuffordLab / GenomeQC
  ☆32Updated 3 years ago
• alachins / sweed
  Likelihood-based Selective Sweep Detection
  ☆35Updated 11 months ago
• vgteam / giraffe-sv-paper
  ☆39Updated 4 months ago
• LeanQ / SPLITREADER
  Split-read pipeline for the identification of non-reference TE insertions with TSDs
  ☆24Updated 4 years ago
• aubombarely / GenoToolBox
  A box of genomics tools
  ☆21Updated 4 years ago
• amsession / Kmer-based-Subgenome-Mapping
  ☆19Updated last month
• JiaoLab2021 / EVG
  A rapid and accurate ensemble pipeline for graph-based variant genotyping with lower depth of short reads
  ☆28Updated 2 months ago
• lauguma / GWideCodeML
  A Python package for testing evolutionary hypotheses in genome-wide approaches.
  ☆31Updated 3 years ago
• hillerlab / CESAR2.0
  ☆27Updated last year
• baozg / phased-assembly-check
  ☆27Updated 2 weeks ago
• clemgoub / dnaPipeTE
  dnaPipeTE (for de-novo assembly & annotation Pipeline for Transposable Elements), is a pipeline designed to find, annotate and quantify T…
  ☆47Updated last year
• FAANG / analysis-TAGADA
  GENE-SWitCH project RNA-Seq analysis pipeline
  ☆23Updated 4 months ago
• obenno / ShinySyn
  A shiny application to visualize MCscan result
  ☆31Updated last year
• clemgoub / rm2gff3
  Convert RepeatMasker ".out" file into a gff3 with colors!!!
  ☆19Updated 4 years ago
• JM-SONG / GenomeSyn
  ☆19Updated 2 years ago
• PacificBiosciences / pbipa
  Improved Phased Assembler
  ☆27Updated 2 years ago
• HullUni-bioinformatics / TE-search-tools
  Python wrappers for programs that search for transposable elements
  ☆19Updated 8 years ago
• johnssproul / RepeatProfiler
  ☆24Updated 2 years ago
• reubwn / collinearity
  scripts to parse and analyse MCScanX collinearity output
  ☆29Updated 4 years ago
• Yandell-Lab / maker
  Genome Annotation Pipeline
  ☆28Updated 3 weeks ago
• schatzlab / crossstitch
  Code for phasing SVs with SNPs
  ☆52Updated 4 years ago
• farhangus / Sniffles2_plot
  ☆23Updated last month
• dePamphilis / PlantTribes
  PlantTribes is a collection of automated gene family analysis pipelines for comparative plant genomics
  ☆32Updated last year
• srividya22 / geneLift
  Gene model transfer from closely related reference genomes using cDNA alignments
  ☆10Updated 4 years ago
• wjian8 / psvcp_v1.01
  Pan-genome Construction and Population Structure Variation Calling pipeline
  ☆33Updated last week
• hillerlab / GeneLossPipe
  ☆23Updated last year