Tool for assessing/improving assembly quality in extra-long tandem repeats
☆49Feb 23, 2021Updated 5 years ago
Alternatives and similar repositories for TandemTools
Users that are interested in TandemTools are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆39Feb 22, 2023Updated 3 years ago
- Evaluate variant calls and its combination with k-mer multiplicity☆68Dec 2, 2022Updated 3 years ago
- base-accurate DNA sequence alignments using edlib and mashmap2☆32Feb 15, 2021Updated 5 years ago
- TGS scaffolding☆47Nov 19, 2021Updated 4 years ago
- ☆16Apr 9, 2021Updated 5 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Translocator: local realignment and global remapping enabling accurate translocation detection using single-molecule sequencing long read…☆12Jan 22, 2020Updated 6 years ago
- Tool for decomposition centromeric assemblies and long reads into monomers☆37Sep 17, 2022Updated 3 years ago
- Simple tools for working with Hi-C data☆20Dec 19, 2018Updated 7 years ago
- recompute GFA link overlaps☆26Sep 14, 2022Updated 3 years ago
- Hybrid error correction approach for long reads using overlap graph☆11Sep 26, 2023Updated 2 years ago
- SRF: Satellite Repeat Finder☆104Jan 8, 2024Updated 2 years ago
- Genome Assembly Validation via Inter-SUNK distances in ONT reads☆15Feb 20, 2023Updated 3 years ago
- Genome Pair Rapid Dotter☆68Sep 2, 2021Updated 4 years ago
- ☆121Updated this week
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Population-scale detection of non-reference sequence variants using colored de Bruijn Graphs☆26Apr 29, 2024Updated 2 years ago
- findGSE is a tool for estimating size of (heterozygous diploid or homozygous) genomes by fitting k-mer frequencies iteratively with a ske…☆38Jan 16, 2024Updated 2 years ago
- PECAT, a phased error correct and assembly tool