A fast whole-genome aligner based on de Bruijn graphs
☆160Jul 6, 2025Updated 11 months ago
Alternatives and similar repositories for SibeliaZ
Users that are interested in SibeliaZ are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A tool for recovering synteny blocks from multiple alignment☆33Oct 18, 2021Updated 4 years ago
- alignment to variation graph inducer☆161Jun 17, 2026Updated last week
- Chromosome-level scaffolding using multiple references☆169Sep 8, 2024Updated last year
- Segmental Duplication Assembler (SDA).☆44May 7, 2023Updated 3 years ago
- Hybrid error correction of long reads using colored de Bruijn graphs☆108Jan 17, 2026Updated 5 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- A plant organellar Graphical Fragment Assembly toolkit☆16Sep 10, 2025Updated 9 months ago
- k-mer based assembly evaluation☆344May 21, 2026Updated last month
- 🔗Genome assembly scaffolder using minimizer graphs☆88Apr 1, 2026Updated 2 months ago
- Visualize whole genome alignments as linear maps☆74Mar 27, 2026Updated 3 months ago
- Program for aligning DNA sequences, a pairwise aligner.☆249May 20, 2026Updated last month
- Tool to plot synteny and structural rearrangements between genomes☆348Apr 7, 2025Updated last year
- Tools for fast and flexible genome assembly scaffolding and improvement☆567Feb 14, 2024Updated 2 years ago
- Synteny and Rearrangement Identifier☆474Jun 20, 2026Updated last week
- An accurate GFF3/GTF lift over pipeline☆546Aug 1, 2023Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Official home of genome aligner based upon notion of Cactus graphs☆689Jun 19, 2026Updated last week
- Detecting multi-genome synteny using minimizer graph mapping☆108Jun 12, 2026Updated 2 weeks ago
- the pangenome graph builder☆505Mar 31, 2026Updated 2 months ago
- Tools for manipulating sequence graphs in the GFA and rGFA formats☆252Dec 16, 2025Updated 6 months ago
- ☆189May 22, 2025Updated last year
- Location of structural errors in a genome assembly and structural variations between a pair of genomes☆11Sep 27, 2019Updated 6 years ago
- Peregrine: Fast Genome Assembler Using SHIMMER Index☆102Feb 6, 2022Updated 4 years ago
- SALSA: A tool to scaffold long read assemblies with Hi-C data☆189May 17, 2024Updated 2 years ago
- An accurate and ultra-fast hybrid genome assembler