Directed evolution of proteins in sequence space with gradients
☆96Oct 18, 2025Updated 7 months ago
Alternatives and similar repositories for EvoProtGrad
Users that are interested in EvoProtGrad are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Official repository for "Plug & Play Directed Evolution for Proteins with Gradient-Based Discrete MCMC"☆12Jul 18, 2023Updated 2 years ago
- Target Sequence-Conditioned Generation of Peptide Binders via Masked Language Modeling☆128Oct 30, 2025Updated 7 months ago
- Sidechain conditioning and modeling for full-atom protein sequence design☆139Nov 11, 2025Updated 6 months ago
- ☆98Oct 14, 2025Updated 7 months ago
- Design data and process for the AdaptyvBio protein design competition☆11Dec 11, 2024Updated last year
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Template-based protein design with Raygun☆81Apr 12, 2026Updated last month
- ProteusAI is a library for the machine learning driven engineering of proteins. The library enables workflows from protein structure pred…☆85Sep 11, 2025Updated 8 months ago
- PLM based active learning model for protein engineering☆86Aug 6, 2024Updated last year
- Generating and scoring novel enzyme sequences with a variety of models and metrics☆72Feb 21, 2026Updated 3 months ago
- An Interface-Predicting Language Model for Designing Peptide-Guided Protein Degraders☆16Sep 10, 2024Updated last year
- Diffusion-based all-atom protein generative model.☆236Aug 27, 2025Updated 9 months ago
- Protein Design with Guided Discrete Diffusion☆143Feb 21, 2024Updated 2 years ago
- Efficient evolution from protein language models☆226Aug 26, 2023Updated 2 years ago
- LatentDE: Latent-based Directed Evolution for Protein Sequence Design☆38Apr 2, 2025Updated last year
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- Making Protein Language Modeling Accessible to All Biologists☆164Updated this week
- Official code repository for the paper "ProteinNPT: Improving Protein Property Prediction and Design with Non-Parametric Transformers"☆130Nov 19, 2025Updated 6 months ago
- GNN trained to predict changes in thermodynamic stability for protein point mutants☆255Mar 26, 2026Updated 2 months ago
- FAPLM: A Drop-in Efficient Pytorch Implementation of Protein Language Models☆168Mar 28, 2026Updated 2 months ago
- Minimal AlphaFold☆56Aug 24, 2024Updated last year
- Official repository for DiffPepBuilder and DiffPepDock tools☆128Oct 24, 2025Updated 7 months ago
- Protein structure diffusion model for unconditional protein generation and motif scaffolding☆192Jun 24, 2024Updated last year
- Efficient manipulation of protein structures in Python☆68Sep 27, 2025Updated 8 months ago
- Official repository for the ProteinGym benchmarks☆433Mar 25, 2026Updated 2 months ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Generation of protein sequences and evolutionary alignments via discrete diffusion models☆671Jan 15, 2026Updated 4 months ago
- Inference code for PoET: A generative model of protein families as sequences-of-sequences☆100Apr 24, 2024Updated 2 years ago
- This repo contains the codes for our paper "End-to-End Full-Atom Antibody Design"☆132Feb 26, 2025Updated last year
- Machine learning-driven antibody design☆63Jul 5, 2023Updated 2 years ago
- Utility for building inverse rotamer assemblies out of a Rosetta matcher/enzdes constraint file.☆27Mar 8, 2025Updated last year
- ☆133Jul 12, 2024Updated last year
- ☆406Aug 7, 2024Updated last year
- Aligning protein generative models with experimental fitness☆121Mar 12, 2026Updated 2 months ago
- Adapting protein language models for structure-conditioned design☆42Aug 5, 2024Updated last year
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- Making Protein Design accessible to all via Google Colab!☆913Apr 6, 2026Updated 2 months ago
- ☆215Sep 24, 2024Updated last year
- Versatile computational pipeline for processing protein structure data for deep learning applications.☆279Feb 14, 2024Updated 2 years ago
- ☆132May 19, 2026Updated 2 weeks ago
- Bilingual Language Model for Protein Sequence and Structure☆310Mar 6, 2026Updated 3 months ago
- A list of manuscripts/tools using diffusion on biological enttieis☆100Oct 5, 2023Updated 2 years ago
- ☆150Jul 16, 2025Updated 10 months ago