Target Sequence-Conditioned Generation of Peptide Binders via Masked Language Modeling
☆130Oct 30, 2025Updated 8 months ago
Alternatives and similar repositories for pepmlm
Users that are interested in pepmlm are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Directed evolution of proteins in sequence space with gradients☆96Oct 18, 2025Updated 8 months ago
- Official repository for DiffPepBuilder and DiffPepDock tools☆127Oct 24, 2025Updated 8 months ago
- In silico directed evolution of peptide binders with AlphaFold☆273Apr 24, 2026Updated 2 months ago
- ☆409Aug 7, 2024Updated last year
- ☆13May 24, 2026Updated last month
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆593Feb 6, 2025Updated last year
- Making Protein Design accessible to all via Google Colab!☆918Apr 6, 2026Updated 2 months ago
- ☆84Jan 23, 2026Updated 5 months ago
- Code for humanization of antibody and nanobody☆88Aug 28, 2025Updated 10 months ago
- Python package for the analysis of natural and modified peptides using a set of modules to study their sequences☆62Mar 23, 2026Updated 3 months ago
- Design data and process for the AdaptyvBio protein design competition☆11Dec 11, 2024Updated last year
- BindCraft modified to make PyRosetta use and installation optional: no license needed☆146Nov 30, 2025Updated 7 months ago
- Sidechain conditioning and modeling for full-atom protein sequence design☆142Nov 11, 2025Updated 7 months ago
- User friendly and accurate binder design pipeline☆1,145May 11, 2026Updated last month
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- ☆47Sep 16, 2024Updated last year
- ☆504Mar 5, 2026Updated 3 months ago
- A generative model for programmable protein design☆821Apr 11, 2024Updated 2 years ago
- AlphaFold-initiated replica exchange protein docking☆92Jun 5, 2025Updated last year
- Official repository for the ProteinGym benchmarks☆440Mar 25, 2026Updated 3 months ago
- Efficient manipulation of protein structures in Python☆68Jun 16, 2026Updated 2 weeks ago
- Learning the language of protein-protein interactions☆150Jun 15, 2026Updated 2 weeks ago
- Geometric deep learning method to predict protein binding interfaces from a protein structure.☆161Oct 11, 2023Updated 2 years ago
- ☆30Aug 8, 2025Updated 10 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Deep learning tools for peptide substrate prediction and generation☆44Nov 20, 2025Updated 7 months ago
- PLM based active learning model for protein engineering☆86Aug 6, 2024Updated last year
- ☆256Feb 12, 2026Updated 4 months ago
- ☆21Oct 26, 2024Updated last year
- ☆15Nov 20, 2024Updated last year
- GNN trained to predict changes in thermodynamic stability for protein point mutants☆258Mar 26, 2026Updated 3 months ago
- Diffusion-based all-atom protein generative model.☆237Aug 27, 2025Updated 10 months ago
- Joint sequence and structure generation with RoseTTAFold sequence space diffusion☆332Oct 28, 2024Updated last year
- ☆133Jul 12, 2024Updated last year
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- A Unified Evaluation Suite for Protein Design☆138Jan 27, 2026Updated 5 months ago
- Structure-conditioned masked language modeling for protein sequence design☆73Jan 31, 2024Updated 2 years ago
- Official Implementation of IgGM☆199May 28, 2026Updated last month
- Protein hallucination and inpainting with RoseTTAFold☆284Mar 30, 2023Updated 3 years ago
- Public RFDiffusionAA repo☆482Jul 9, 2024Updated last year
- ☆97Oct 14, 2025Updated 8 months ago
- ☆39Jan 26, 2026Updated 5 months ago