Target Sequence-Conditioned Generation of Peptide Binders via Masked Language Modeling
☆121Oct 30, 2025Updated 6 months ago
Alternatives and similar repositories for pepmlm
Users that are interested in pepmlm are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Directed evolution of proteins in sequence space with gradients☆95Oct 18, 2025Updated 6 months ago
- Official repository for DiffPepBuilder and DiffPepDock tools☆125Oct 24, 2025Updated 6 months ago
- In silico directed evolution of peptide binders with AlphaFold☆266Apr 24, 2026Updated last week
- ☆402Aug 7, 2024Updated last year
- ☆13Dec 5, 2024Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆567Feb 6, 2025Updated last year
- Making Protein Design accessible to all via Google Colab!☆909Apr 6, 2026Updated 3 weeks ago
- Code for humanization of antibody and nanobody☆81Aug 28, 2025Updated 8 months ago
- Design data and process for the AdaptyvBio protein design competition☆11Dec 11, 2024Updated last year
- BindCraft modified to make PyRosetta use and installation optional: no license needed☆136Nov 30, 2025Updated 5 months ago
- Sidechain conditioning and modeling for full-atom protein sequence design☆138Nov 11, 2025Updated 5 months ago
- User friendly and accurate binder design pipeline☆1,080Apr 17, 2026Updated 2 weeks ago
- ☆47Sep 16, 2024Updated last year
- ☆27Aug 8, 2025Updated 8 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆483Mar 5, 2026Updated last month
- A generative model for programmable protein design☆813Apr 11, 2024Updated 2 years ago
- AlphaFold-initiated replica exchange protein docking☆91Jun 5, 2025Updated 10 months ago
- Official repository for the ProteinGym benchmarks☆420Mar 25, 2026Updated last month
- Efficient manipulation of protein structures in Python☆67Sep 27, 2025Updated 7 months ago
- ☆76Jan 23, 2026Updated 3 months ago
- Learning the language of protein-protein interactions☆145Apr 14, 2026Updated 2 weeks ago
- Geometric deep learning method to predict protein binding interfaces from a protein structure.☆157Oct 11, 2023Updated 2 years ago
- Deep learning tools for peptide substrate prediction and generation☆43Nov 20, 2025Updated 5 months ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- PLM based active learning model for protein engineering☆86Aug 6, 2024Updated last year
- Python package for the analysis of natural and modified peptides using a set of modules to study their sequences☆57Mar 23, 2026Updated last month
- ☆247Feb 12, 2026Updated 2 months ago
- ☆14Nov 20, 2024Updated last year
- ☆21Oct 26, 2024Updated last year
- GNN trained to predict changes in thermodynamic stability for protein point mutants☆247Mar 26, 2026Updated last month
- Diffusion-based all-atom protein generative model.☆235Aug 27, 2025Updated 8 months ago
- Joint sequence and structure generation with RoseTTAFold sequence space diffusion☆333Oct 28, 2024Updated last year
- ☆127Jul 12, 2024Updated last year
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- A Unified Evaluation Suite for Protein Design☆130Jan 27, 2026Updated 3 months ago
- Structure-conditioned masked language modeling for protein sequence design☆73Jan 31, 2024Updated 2 years ago
- Official Implementation of IgGM☆187Nov 30, 2025Updated 5 months ago
- Protein hallucination and inpainting with RoseTTAFold☆281Mar 30, 2023Updated 3 years ago
- Public RFDiffusionAA repo☆480Jul 9, 2024Updated last year
- ☆97Oct 14, 2025Updated 6 months ago
- ☆37Jan 26, 2026Updated 3 months ago