Target Sequence-Conditioned Generation of Peptide Binders via Masked Language Modeling
☆130Oct 30, 2025Updated 9 months ago
Alternatives and similar repositories for pepmlm
Users that are interested in pepmlm are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- In silico directed evolution of peptide binders with AlphaFold☆274Apr 24, 2026Updated 3 months ago
- User friendly and accurate binder design pipeline☆1,182May 11, 2026Updated 2 months ago
- Official repository for DiffPepBuilder and DiffPepDock tools☆129Oct 24, 2025Updated 9 months ago
- ☆414Aug 7, 2024Updated 2 years ago
- ☆618Feb 6, 2025Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Official repository of PXDesign☆243Dec 31, 2025Updated 7 months ago
- ☆13May 24, 2026Updated 2 months ago
- Official Implementation of IgGM☆217May 28, 2026Updated 2 months ago
- Directed evolution of proteins in sequence space with gradients☆96Oct 18, 2025Updated 9 months ago
- Making Protein Design accessible to all via Google Colab!☆926Apr 6, 2026Updated 4 months ago
- GNN trained to predict changes in thermodynamic stability for protein point mutants☆263Mar 26, 2026Updated 4 months ago
- BindCraft modified to make PyRosetta use and installation optional: no license needed☆148Jul 10, 2026Updated last month
- ☆258Feb 12, 2026Updated 5 months ago
- Python package for the analysis of natural and modified peptides using a set of modules to study their sequences☆64Mar 23, 2026Updated 4 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Inference code for RFdiffusion2☆438Apr 3, 2026Updated 4 months ago
- BoltzGen: Toward Universal Binder Design☆1,029May 28, 2026Updated 2 months ago
- ☆143Jun 16, 2026Updated last month
- de novo design of high affinity biological binders☆194Jun 22, 2026Updated last month
- Structure prediction and design of proteins with noncanonical amino acids☆139Feb 1, 2026Updated 6 months ago
- ☆93Oct 23, 2025Updated 9 months ago
- Codebase for Germinal, a broadly enabling generative pipeline for efficient generation of epitope-targeted de novo antibodies.☆276Apr 24, 2026Updated 3 months ago
- mBER - Manifold Binder Engineering and Refinement. mBER enables antibody binder design by leveraging structure templates and sequence con…☆143Apr 27, 2026Updated 3 months ago
- ☆520Mar 5, 2026Updated 5 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆16Mar 19, 2026Updated 4 months ago
- Proteina is a new large-scale flow-based protein backbone generator that utilizes hierarchical fold class labels for conditioning and rel…☆270Jul 24, 2025Updated last year
- A Score-Only Adaptation of AlphaFold3 for Biomolecular Structure Evaluation☆135Jan 28, 2026Updated 6 months ago
- Codes for our paper "Full-Atom Peptide Design with Geometric Latent Diffusion" (NeurIPS 2024)☆129Apr 16, 2025Updated last year
- A generalized computational framework for biomolecular modeling.☆439Updated this week
- Generative model for protein binder design for protein and small molecule targets. Combines a pretrained flow-based generative model (bui…☆411Updated this week
- composite-objective protein design☆353Aug 1, 2026Updated last week
- Central repository for biomolecular foundation models with shared trainers and pipeline components☆924Updated this week
- A Unified Evaluation Suite for Protein Design☆137Jan 27, 2026Updated 6 months ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- ☆88Jan 23, 2026Updated 6 months ago
- Updated Protpardelle models with more robust motif scaffolding and multichain support☆83May 1, 2026Updated 3 months ago
- ☆48Sep 24, 2025Updated 10 months ago
- IntelliFold: A Controllable Foundation Model for General and Specialized Biomolecular Structure Prediction.☆227Jun 23, 2026Updated last month
- Code for the DiscoTope-3.0 paper and model☆20May 5, 2026Updated 3 months ago
- ☆15Nov 20, 2024Updated last year
- Improved antibody structure-based design using inverse folding☆171Dec 9, 2025Updated 8 months ago