Profluent-E1 family of Protein Encoder Models
☆113Mar 11, 2026Updated 4 months ago
Alternatives and similar repositories for E1
Users that are interested in E1 are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- composite-objective protein design☆348Jul 12, 2026Updated last week
- Potts model-based protein sequence design☆107Jul 1, 2026Updated 2 weeks ago
- ☆136Jun 9, 2026Updated last month
- ☆143May 18, 2026Updated 2 months ago
- ☆58May 26, 2026Updated last month
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- All-atom protein generation using latent diffusion, with compositional function and taxonomic prompts. http://bit.ly/plaid-proteins☆127May 27, 2025Updated last year
- Updated Protpardelle models with more robust motif scaffolding and multichain support☆82May 1, 2026Updated 2 months ago
- Genie 3 is a fast, all-atom SE(3)-equivariant diffusion model for protein design. It achieves state-of-the-art performance on uncondition…☆119May 10, 2026Updated 2 months ago
- ☆40Mar 30, 2025Updated last year
- A generalized computational framework for biomolecular modeling.☆433Updated this week
- Scoring function for interprotein interactions in AlphaFold2 and AlphaFold3☆251Jan 3, 2026Updated 6 months ago
- IntelliFold: A Controllable Foundation Model for General and Specialized Biomolecular Structure Prediction.☆228Jun 23, 2026Updated 3 weeks ago
- Learning the language of protein-protein interactions☆150Jun 15, 2026Updated last month
- BoltzGen: Toward Universal Binder Design☆1,011May 28, 2026Updated last month
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ☆257Feb 12, 2026Updated 5 months ago
- One protein is all you need (ICLR 2026)☆113Apr 22, 2026Updated 2 months ago
- Official repository for the Protriever paper☆17Jun 5, 2025Updated last year
- Generative model for protein binder design for protein and small molecule targets. Combines a pretrained flow-based generative model (bui…☆393Updated this week
- Structure-conditioned masked language modeling for protein sequence design☆73Jan 31, 2024Updated 2 years ago
- A fully open source biomolecular structure prediction model based on AlphaFold3☆789Updated this week
- ☆142Jun 16, 2026Updated last month
- Official repository of PXDesign☆236Dec 31, 2025Updated 6 months ago
- Public Release of ProGen3 family of Models☆113Jul 21, 2025Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Inference code for PoET: A generative model of protein families as sequences-of-sequences☆104Apr 24, 2024Updated 2 years ago
- Protein Engineering via Exploration of an Energy Landscape☆141Jul 9, 2026Updated last week
- SwitchCraft: A Programmatic Framework for Designing State-Switching Proteins☆80Jun 1, 2026Updated last month
- Protein Language Modeling beyond static folds reveals sequence-encoded flexibility☆36Feb 1, 2026Updated 5 months ago
- Code for the DISCO model: General Multimodal Protein Design Enables DNA-Encoding of Chemistry☆208May 13, 2026Updated 2 months ago
- A conditionally adapted protein language model for the generation of enzymes☆24Nov 26, 2024Updated last year
- Neural networks to fit interpretable models and quantify energies, energetic couplings, epistasis, and allostery from deep mutational sca…☆57Apr 10, 2025Updated last year
- User friendly and accurate binder design pipeline☆1,160May 11, 2026Updated 2 months ago
- Codebase for Germinal, a broadly enabling generative pipeline for efficient generation of epitope-targeted de novo antibodies.☆271Apr 24, 2026Updated 2 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Directed evolution of proteins in sequence space with gradients☆96Oct 18, 2025Updated 9 months ago
- Inference code for RFdiffusion2☆437Apr 3, 2026Updated 3 months ago
- Extension of ThermoMPNN for double mutant predictions☆63Mar 23, 2026Updated 3 months ago
- A drop-in replacement for Rosetta Relax☆29Jan 30, 2026Updated 5 months ago
- FAPLM: A Drop-in Efficient Pytorch Implementation of Protein Language Models☆167Mar 28, 2026Updated 3 months ago
- ☆99Jul 9, 2026Updated last week
- Aligning protein generative models with experimental fitness☆124Mar 12, 2026Updated 4 months ago