This repo contains the codes for our paper "End-to-End Full-Atom Antibody Design"
☆135Feb 26, 2025Updated last year
Alternatives and similar repositories for dyMEAN
Users that are interested in dyMEAN are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- This repo contains the codes for our paper Conditional Antibody Design as 3D Equivariant Graph Translation.☆110Apr 7, 2023Updated 3 years ago
- ✌🏻 Antigen-Specific Antibody Design and Optimization with Diffusion-Based Generative Models for Protein Structures (NeurIPS 2022)☆368Jun 29, 2023Updated 3 years ago
- Guiding diffusion models for antibody sequence and structure co-design with developability properties.☆38Nov 7, 2024Updated last year
- ☆110Apr 1, 2023Updated 3 years ago
- open source repository☆149Nov 30, 2023Updated 2 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Generative Language Modeling for Antibody Design☆195Jul 20, 2026Updated last month
- Fast, accurate antibody structure prediction from deep learning on massive set of natural antibodies☆426Jul 20, 2026Updated last month
- Antibody-specific masked language model☆80Mar 5, 2026Updated 5 months ago
- Official implementation of Generative Diffusion Models for Antibody Design, Docking, and Optimization.☆63Oct 25, 2023Updated 2 years ago
- Improved antibody structure-based design using inverse folding☆175Dec 9, 2025Updated 8 months ago
- Official Implementation of IgGM☆223May 28, 2026Updated 3 months ago
- Rotamer Density Estimator is an Unsupervised Learner of the Effect of Mutations on Protein-Protein Interaction (ICLR 2023)☆63Jun 17, 2024Updated 2 years ago
- ☆218Sep 24, 2024Updated last year
- ☆100Oct 15, 2024Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- PyTorch code for KDD 2023 paper "Pre-training Antibody Language Models for Antigen-Specific Computational Antibody Design"☆56Nov 14, 2023Updated 2 years ago
- open source code for Tencent tFold☆164Mar 14, 2025Updated last year
- NeurIPS 2023 Spotlight paper: Full atom protein pocket design via iterative refinement☆49Oct 28, 2023Updated 2 years ago
- Machine learning-driven antibody design☆64Jul 5, 2023Updated 3 years ago
- Protein Design with Guided Discrete Diffusion☆144Feb 21, 2024Updated 2 years ago
- p-IgGen: A Generative Paired Antibody Language Model☆13May 6, 2025Updated last year
- Protein language model customized for antibodies☆155Mar 21, 2025Updated last year
- Antibody Langauge Ensemble Fusion - fuses antibody structural ensemble and language representation for property prediction☆14Apr 23, 2024Updated 2 years ago
- Code for ColabDock paper☆157May 1, 2025Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆133Sep 5, 2022Updated 3 years ago
- Implementation of DiffDock-PP: Rigid Protein-Protein Docking with Diffusion Models in PyTorch (ICLR 2023 - MLDD Workshop)☆241Dec 29, 2023Updated 2 years ago
- Joint sequence and structure generation with RoseTTAFold sequence space diffusion☆332Oct 28, 2024Updated last year
- ☆12Aug 26, 2024Updated 2 years ago
- Diffusion-based all-atom protein generative model.☆238Aug 27, 2025Updated last year
- Fast protein backbone generation with SE(3) flow matching.☆330Jul 19, 2024Updated 2 years ago
- Official implementation for the paper "EBMDOCK: NEURAL PROBABILISTIC PROTEIN-PROTEIN DOCKING VIA A DIFFERENTIABLE ENERGY-BASED MODEL" (IC…☆14Apr 24, 2024Updated 2 years ago
- Codes for our paper "Full-Atom Peptide Design with Geometric Latent Diffusion" (NeurIPS 2024)☆130Apr 16, 2025Updated last year
- The official implementation of DiffAbXL benchmarked in the paper "Exploring Log-Likelihood Scores for Ranking Antibody Sequence Designs",…☆100Jun 11, 2025Updated last year
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- ☆77Sep 2, 2020Updated 6 years ago
- GNN trained to predict changes in thermodynamic stability for protein point mutants☆265Mar 26, 2026Updated 5 months ago
- ☆27Dec 6, 2022Updated 3 years ago
- Evaluating Protein Binding Interfaces with Transformer Networks☆46Oct 24, 2023Updated 2 years ago
- Code for humanization of antibody and nanobody☆94Aug 28, 2025Updated last year
- Implementation for SE(3) diffusion model with application to protein backbone generation☆423Jul 3, 2023Updated 3 years ago
- AbLang: A language model for antibodies☆171Sep 22, 2023Updated 2 years ago