This repo contains the codes for our paper "End-to-End Full-Atom Antibody Design"
☆132Feb 26, 2025Updated last year
Alternatives and similar repositories for dyMEAN
Users that are interested in dyMEAN are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- This repo contains the codes for our paper Conditional Antibody Design as 3D Equivariant Graph Translation.☆108Apr 7, 2023Updated 3 years ago
- ✌🏻 Antigen-Specific Antibody Design and Optimization with Diffusion-Based Generative Models for Protein Structures (NeurIPS 2022)☆362Jun 29, 2023Updated 2 years ago
- Guiding diffusion models for antibody sequence and structure co-design with developability properties.☆38Nov 7, 2024Updated last year
- ☆110Apr 1, 2023Updated 3 years ago
- open source repository☆148Nov 30, 2023Updated 2 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Antibody-specific masked language model☆78Mar 5, 2026Updated 3 months ago
- Generative Language Modeling for Antibody Design☆190Oct 5, 2024Updated last year
- Fast, accurate antibody structure prediction from deep learning on massive set of natural antibodies☆421Sep 3, 2023Updated 2 years ago
- Official implementation of Generative Diffusion Models for Antibody Design, Docking, and Optimization.☆61Oct 25, 2023Updated 2 years ago
- Improved antibody structure-based design using inverse folding☆164Dec 9, 2025Updated 6 months ago
- Polyreactivity Website☆22Jun 26, 2023Updated 2 years ago
- Rotamer Density Estimator is an Unsupervised Learner of the Effect of Mutations on Protein-Protein Interaction (ICLR 2023)☆62Jun 17, 2024Updated last year
- PyTorch code for KDD 2023 paper "Pre-training Antibody Language Models for Antigen-Specific Computational Antibody Design"☆55Nov 14, 2023Updated 2 years ago
- ☆100Oct 15, 2024Updated last year
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- ☆215Sep 24, 2024Updated last year
- Official open-source of Antibody Design Using a Score-based Diffusion Model Guided by Evolutionary, Physical, and Geometric Constraints☆51Jun 30, 2025Updated 11 months ago
- NeurIPS 2023 Spotlight paper: Full atom protein pocket design via iterative refinement☆49Oct 28, 2023Updated 2 years ago
- p-IgGen: A Generative Paired Antibody Language Model☆13May 6, 2025Updated last year
- Protein Design with Guided Discrete Diffusion☆143Feb 21, 2024Updated 2 years ago
- open source code for Tencent tFold☆158Mar 14, 2025Updated last year
- Machine learning-driven antibody design☆63Jul 5, 2023Updated 2 years ago
- Protein language model customized for antibodies☆152Mar 21, 2025Updated last year
- GNN trained to predict changes in thermodynamic stability for protein point mutants☆257Mar 26, 2026Updated 2 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆131Sep 5, 2022Updated 3 years ago
- Implementation of DiffDock-PP: Rigid Protein-Protein Docking with Diffusion Models in PyTorch (ICLR 2023 - MLDD Workshop)☆236Dec 29, 2023Updated 2 years ago
- Code for ColabDock paper☆156May 1, 2025Updated last year
- Codes for our paper "Full-Atom Peptide Design with Geometric Latent Diffusion" (NeurIPS 2024)☆124Apr 16, 2025Updated last year
- Official Implementation of IgGM☆197May 28, 2026Updated 2 weeks ago
- ☆12Aug 26, 2024Updated last year
- Joint sequence and structure generation with RoseTTAFold sequence space diffusion☆333Oct 28, 2024Updated last year
- Official implementation for the paper "EBMDOCK: NEURAL PROBABILISTIC PROTEIN-PROTEIN DOCKING VIA A DIFFERENTIABLE ENERGY-BASED MODEL" (IC…☆14Apr 24, 2024Updated 2 years ago
- Antibody Langauge Ensemble Fusion - fuses antibody structural ensemble and language representation for property prediction☆14Apr 23, 2024Updated 2 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- Fast protein backbone generation with SE(3) flow matching.☆326Jul 19, 2024Updated last year
- Diffusion-based all-atom protein generative model.☆236Aug 27, 2025Updated 9 months ago
- Code for humanization of antibody and nanobody☆85Aug 28, 2025Updated 9 months ago
- The official implementation of DiffAbXL benchmarked in the paper "Exploring Log-Likelihood Scores for Ranking Antibody Sequence Designs",…☆98Jun 11, 2025Updated last year
- ☆76Sep 2, 2020Updated 5 years ago
- Protein representation and design under a single training scheme☆24May 17, 2026Updated 3 weeks ago
- ☆27Dec 6, 2022Updated 3 years ago