Minimal AlphaFold
☆56Aug 24, 2024Updated last year
Alternatives and similar repositories for minimalaf
Users that are interested in minimalaf are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Design data and process for the AdaptyvBio protein design competition☆11Dec 11, 2024Updated last year
- Code for deep learning guided design of dynamic proteins☆33Jul 16, 2024Updated last year
- Structure-conditioned masked language modeling for protein sequence design☆74Jan 31, 2024Updated 2 years ago
- ☆21Oct 26, 2024Updated last year
- Directed evolution of proteins in sequence space with gradients☆96Oct 18, 2025Updated 7 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- A list of manuscripts/tools using diffusion on biological enttieis☆100Oct 5, 2023Updated 2 years ago
- Resources for the BioML Challenge 2024: Bits to Binders☆19Aug 24, 2024Updated last year
- Sidechain conditioning and modeling for full-atom protein sequence design☆140Nov 11, 2025Updated 7 months ago
- Sequences from Adaptyv Bio’s EGFR Protein Design Competition☆16Aug 28, 2025Updated 9 months ago
- Official repository for DiffPepBuilder and DiffPepDock tools☆128Oct 24, 2025Updated 7 months ago
- Generative diverse protein backbones by protein language model☆35Feb 27, 2026Updated 3 months ago
- Sequence-Structure-Surface Model for Protein Fitness Prediction (S3F)☆52Dec 3, 2024Updated last year
- ☆13May 24, 2026Updated 3 weeks ago
- Protein representation and design under a single training scheme☆24May 17, 2026Updated 3 weeks ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- mmCIF-based extension dictionary for computed structure models☆24Feb 5, 2026Updated 4 months ago
- Target Sequence-Conditioned Generation of Peptide Binders via Masked Language Modeling☆128Oct 30, 2025Updated 7 months ago
- Metrics for our protein design competitions.☆35Nov 1, 2024Updated last year
- Versatile computational pipeline for processing protein structure data for deep learning applications.☆279Feb 14, 2024Updated 2 years ago
- Visualize structure data from Biotite with PyMOL☆26Mar 16, 2025Updated last year
- AlphaLink2: Integrating crosslinking MS data into Uni-Fold-Multimer☆68Aug 26, 2025Updated 9 months ago
- ☆98Oct 14, 2025Updated 8 months ago
- Protein structure diffusion model for unconditional protein generation and motif scaffolding☆192Jun 24, 2024Updated last year
- A simple but powerful VSCode extension for visualizing protein structures using the Molstar framework.☆36Oct 17, 2025Updated 7 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- composite-objective protein design☆335Updated this week
- bioinformatics tools running on modal☆158Jun 3, 2026Updated last week
- Efficient implementatin of ESM family.☆85Sep 9, 2025Updated 9 months ago
- Fast protein backbone generation with SE(3) flow matching.☆326Jul 19, 2024Updated last year
- Scoring function for interprotein interactions in AlphaFold2 and AlphaFold3☆243Jan 3, 2026Updated 5 months ago
- ☆18Jun 13, 2025Updated last year
- Generating and scoring novel enzyme sequences with a variety of models and metrics☆72Feb 21, 2026Updated 3 months ago
- Reaction-Conditioned Virtual Screening of Enzymes☆45Jun 11, 2025Updated last year
- Utility for building inverse rotamer assemblies out of a Rosetta matcher/enzdes constraint file.☆27Mar 8, 2025Updated last year
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- MaSIF-neosurf: surface-based protein design for ternary complexes.☆174Feb 6, 2026Updated 4 months ago
- Graphormer Based Protein Sequence Design☆26Feb 2, 2024Updated 2 years ago
- In silico directed evolution of peptide binders with AlphaFold☆269Apr 24, 2026Updated last month
- Send data to and from pymol from a remote server (e.g. a cluster running deep learning workflows)☆38Feb 17, 2025Updated last year
- code and source data for de novo design of Kemp elimination paper☆26Sep 18, 2025Updated 8 months ago
- Tutorial files☆12Aug 7, 2024Updated last year
- FAPLM: A Drop-in Efficient Pytorch Implementation of Protein Language Models☆168Mar 28, 2026Updated 2 months ago