Official repository for DiffPepBuilder and DiffPepDock tools
☆130Oct 24, 2025Updated 9 months ago
Alternatives and similar repositories for DiffPepBuilder
Users that are interested in DiffPepBuilder are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- In silico directed evolution of peptide binders with AlphaFold☆274Apr 24, 2026Updated 3 months ago
- Full-Atom Peptide Design based on Multi-modal Flow Matching (ICML 2024)☆110May 25, 2025Updated last year
- Sidechain conditioning and modeling for full-atom protein sequence design☆148Nov 11, 2025Updated 9 months ago
- Structure prediction and design of proteins with noncanonical amino acids☆140Feb 1, 2026Updated 6 months ago
- Target Sequence-Conditioned Generation of Peptide Binders via Masked Language Modeling☆131Oct 30, 2025Updated 9 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Diffusion-based all-atom protein generative model.☆237Aug 27, 2025Updated 11 months ago
- A Unified Evaluation Suite for Protein Design☆137Jan 27, 2026Updated 6 months ago
- ☆258Feb 12, 2026Updated 6 months ago
- ☆28Mar 21, 2025Updated last year
- Controlling the usage of hydrophobic residues on AfDesign for binder peptide design with AlphaFold hallucination protocol☆31Aug 10, 2023Updated 3 years ago
- All-atom protein generation using latent diffusion, with compositional function and taxonomic prompts. http://bit.ly/plaid-proteins☆127May 27, 2025Updated last year
- ☆13May 24, 2026Updated 2 months ago
- User friendly and accurate binder design pipeline☆1,187Updated this week
- HalluDesign, a hallucination-driven all-atom framework for the iterative co-optimization and co-design of protein sequences and structure…☆86Jul 23, 2026Updated 3 weeks ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆89Jan 23, 2026Updated 6 months ago
- Making Protein Design accessible to all via Google Colab!☆927Apr 6, 2026Updated 4 months ago
- GNN trained to predict changes in thermodynamic stability for protein point mutants☆263Mar 26, 2026Updated 4 months ago
- A cyclic peptide-protein complex dataset derived from AFDB.☆66Mar 17, 2026Updated 4 months ago
- ☆118Jan 3, 2026Updated 7 months ago
- Protein structure diffusion model for unconditional protein generation and motif scaffolding☆194Jun 24, 2024Updated 2 years ago
- Reinforcement learning based cyclic peptide binder design☆18Jul 22, 2025Updated last year
- ☆21Oct 26, 2024Updated last year
- ☆100Jul 24, 2026Updated 3 weeks ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- ☆39Aug 28, 2023Updated 2 years ago
- Template-based protein design with Raygun☆136Jul 30, 2026Updated 2 weeks ago
- Codes for our paper "Full-Atom Peptide Design with Geometric Latent Diffusion" (NeurIPS 2024)☆129Apr 16, 2025Updated last year
- BindCraft modified to make PyRosetta use and installation optional: no license needed☆148Jul 10, 2026Updated last month
- ☆15May 29, 2024Updated 2 years ago
- The package of ProBuilder from Longxing Cao lab☆23Jan 19, 2026Updated 6 months ago
- ☆42Mar 7, 2026Updated 5 months ago
- Code release for "Improving diffusion-based protein backbone generation with global-geometry-aware latent encoding"☆48Aug 5, 2025Updated last year
- Implementation for SE(3) diffusion model with application to protein backbone generation☆423Jul 3, 2023Updated 3 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ☆42Mar 30, 2025Updated last year
- Fast protein backbone generation with SE(3) flow matching.☆327Jul 19, 2024Updated 2 years ago
- Code for humanization of antibody and nanobody☆92Aug 28, 2025Updated 11 months ago
- ☆21Nov 21, 2025Updated 8 months ago
- Extension of ThermoMPNN for double mutant predictions☆64Mar 23, 2026Updated 4 months ago
- Feynman-Kac steering for controllable protein diffusion☆37Aug 6, 2026Updated last week
- Implementation of CycPeptMP, an accurate and efficient model for predicting the membrane permeability of cyclic peptides☆34May 10, 2025Updated last year