Official repository for DiffPepBuilder and DiffPepDock tools
☆134Oct 24, 2025Updated 11 months ago
Alternatives and similar repositories for DiffPepBuilder
Users that are interested in DiffPepBuilder are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- In silico directed evolution of peptide binders with AlphaFold☆280Aug 27, 2026Updated 3 weeks ago
- Full-Atom Peptide Design based on Multi-modal Flow Matching (ICML 2024)☆113May 25, 2025Updated last year
- Sidechain conditioning and modeling for full-atom protein sequence design☆150Nov 11, 2025Updated 10 months ago
- Structure prediction and design of proteins with noncanonical amino acids☆147Feb 1, 2026Updated 7 months ago
- Target Sequence-Conditioned Generation of Peptide Binders via Masked Language Modeling☆137Oct 30, 2025Updated 10 months ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Diffusion-based all-atom protein generative model.☆239Aug 27, 2025Updated last year
- A Unified Evaluation Suite for Protein Design☆140Jan 27, 2026Updated 7 months ago
- ☆259Updated this week
- ☆31Mar 21, 2025Updated last year
- Controlling the usage of hydrophobic residues on AfDesign for binder peptide design with AlphaFold hallucination protocol☆31Aug 10, 2023Updated 3 years ago
- All-atom protein generation using latent diffusion, with compositional function and taxonomic prompts. http://bit.ly/plaid-proteins☆126May 27, 2025Updated last year
- ☆13May 24, 2026Updated 4 months ago
- User friendly and accurate binder design pipeline☆1,229Updated this week
- HalluDesign, a hallucination-driven all-atom framework for the iterative co-optimization and co-design of protein sequences and structure…☆92Sep 10, 2026Updated 2 weeks ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- ☆91Jan 23, 2026Updated 8 months ago
- Making Protein Design accessible to all via Google Colab!☆941Aug 28, 2026Updated 3 weeks ago
- GNN trained to predict changes in thermodynamic stability for protein point mutants☆273Sep 9, 2026Updated 2 weeks ago
- A cyclic peptide-protein complex dataset derived from AFDB.☆68Mar 17, 2026Updated 6 months ago
- ☆118Jan 3, 2026Updated 8 months ago
- Protein structure diffusion model for unconditional protein generation and motif scaffolding☆195Jun 24, 2024Updated 2 years ago
- Reinforcement learning based cyclic peptide binder design☆20Jul 22, 2025Updated last year
- ☆21Oct 26, 2024Updated last year
- ☆102Jul 24, 2026Updated 2 months ago
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- ☆39Aug 28, 2023Updated 3 years ago
- Template-based protein design with Raygun☆156Jul 30, 2026Updated last month
- BindCraft modified to make PyRosetta use and installation optional: no license needed☆163Jul 10, 2026Updated 2 months ago
- Codes for our paper "Full-Atom Peptide Design with Geometric Latent Diffusion" (NeurIPS 2024)☆134Apr 16, 2025Updated last year
- ☆15May 29, 2024Updated 2 years ago
- ☆42Mar 7, 2026Updated 6 months ago
- Code release for "Improving diffusion-based protein backbone generation with global-geometry-aware latent encoding"☆48Aug 5, 2025Updated last year
- Implementation for SE(3) diffusion model with application to protein backbone generation☆424Jul 3, 2023Updated 3 years ago
- The package of ProBuilder from Longxing Cao lab☆26Jan 19, 2026Updated 8 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- ☆42Mar 30, 2025Updated last year
- Fast protein backbone generation with SE(3) flow matching.☆330Jul 19, 2024Updated 2 years ago
- Code for humanization of antibody and nanobody☆96Aug 28, 2025Updated last year
- ☆21Nov 21, 2025Updated 10 months ago
- Extension of ThermoMPNN for double mutant predictions☆66Mar 23, 2026Updated 6 months ago
- Feynman-Kac steering for controllable protein diffusion☆38Aug 16, 2026Updated last month
- Implementation of CycPeptMP, an accurate and efficient model for predicting the membrane permeability of cyclic peptides☆35May 10, 2025Updated last year