Official repository for DiffPepBuilder and DiffPepDock tools
☆128Oct 24, 2025Updated 7 months ago
Alternatives and similar repositories for DiffPepBuilder
Users that are interested in DiffPepBuilder are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- In silico directed evolution of peptide binders with AlphaFold☆266Apr 24, 2026Updated last month
- Full-Atom Peptide Design based on Multi-modal Flow Matching (ICML 2024)☆105May 25, 2025Updated last year
- Protein representation and design under a single training scheme☆24May 17, 2026Updated last week
- Target Sequence-Conditioned Generation of Peptide Binders via Masked Language Modeling☆127Oct 30, 2025Updated 6 months ago
- Sidechain conditioning and modeling for full-atom protein sequence design☆138Nov 11, 2025Updated 6 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Design data and process for the AdaptyvBio protein design competition☆11Dec 11, 2024Updated last year
- GNN trained to predict changes in thermodynamic stability for protein point mutants☆252Mar 26, 2026Updated 2 months ago
- ☆79Jan 23, 2026Updated 4 months ago
- Diffusion-based all-atom protein generative model.☆236Aug 27, 2025Updated 8 months ago
- User friendly and accurate binder design pipeline☆1,108May 11, 2026Updated 2 weeks ago
- Structure prediction and design of proteins with noncanonical amino acids☆132Feb 1, 2026Updated 3 months ago
- Controlling the usage of hydrophobic residues on AfDesign for binder peptide design with AlphaFold hallucination protocol☆33Aug 10, 2023Updated 2 years ago
- ☆13Dec 5, 2024Updated last year
- Codes for our paper "Full-Atom Peptide Design with Geometric Latent Diffusion" (NeurIPS 2024)☆111Apr 16, 2025Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Making Protein Design accessible to all via Google Colab!☆914Apr 6, 2026Updated last month
- ☆16Dec 14, 2023Updated 2 years ago
- Protein structure diffusion model for unconditional protein generation and motif scaffolding☆192Jun 24, 2024Updated last year
- ☆119Jan 3, 2026Updated 4 months ago
- Fold Conditioned protein design pipeline based on AF2Multimer Hallucination☆52Mar 25, 2026Updated 2 months ago
- ☆21Oct 26, 2024Updated last year
- Official repository for the paper "Peptide design through binding interface mimicry with PepMimic" accepted by Nature Biomedical Engineer…☆34Oct 20, 2025Updated 7 months ago
- Template-based protein design with Raygun☆81Apr 12, 2026Updated last month
- ☆39Aug 28, 2023Updated 2 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆98Oct 14, 2025Updated 7 months ago
- Code for humanization of antibody and nanobody☆84Aug 28, 2025Updated 8 months ago
- All-atom protein generation using latent diffusion, with compositional function and taxonomic prompts. http://bit.ly/plaid-proteins☆125May 27, 2025Updated 11 months ago
- ☆15May 29, 2024Updated last year
- ☆28Aug 8, 2025Updated 9 months ago
- Implementation for SE(3) diffusion model with application to protein backbone generation☆421Jul 3, 2023Updated 2 years ago
- ProtFlow Implementation of the RiffDiff pipeline to design enzymes from theozymes.☆89Dec 3, 2025Updated 5 months ago
- Fast protein backbone generation with SE(3) flow matching.☆328Jul 19, 2024Updated last year
- RAG-ESM is a retrieval-augmented framework that allows to condition pretrained ESM2 protein language models on homologous sequences☆27Aug 21, 2025Updated 9 months ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Implementation of CycPeptMP, an accurate and efficient model for predicting the membrane permeability of cyclic peptides☆30May 10, 2025Updated last year
- EvolveX, a de novo antibody computational design pipeline.☆23Sep 18, 2025Updated 8 months ago
- Joint sequence and structure generation with RoseTTAFold sequence space diffusion☆334Oct 28, 2024Updated last year
- NeuralPLexer: State-specific protein-ligand complex structure prediction with a multi-scale deep generative model☆329Oct 6, 2025Updated 7 months ago
- ☆33Feb 5, 2025Updated last year
- ☆138Jun 3, 2025Updated 11 months ago
- Public RFDiffusionAA repo☆482Jul 9, 2024Updated last year