Alternatives and similar repositories for Tranception

Users that are interested in Tranception are comparing it to the libraries listed below

• Graylab / IgLM
  Generative Language Modeling for Antibody Design
  ☆173Updated last year
• J-SNACKKB / FLIP
  A collection of tasks to probe the effectiveness of protein sequence representations in modeling aspects of protein design
  ☆109Updated last year
• aqlaboratory / genie
  De Novo Protein Design by Equivariantly Diffusing Oriented Residue Clouds
  ☆183Updated last year
• oxpig / AbLang
  AbLang: A language model for antibodies
  ☆151Updated 2 years ago
• microsoft / protein-sequence-models
  ☆253Updated last year
• rmrao / msa-transformer
  MSA Transformer reproduction code
  ☆87Updated 4 years ago
• amyxlu / cheap-proteins
  Joint embedding of protein sequence and structure with discrete and continuous compressions of protein folding model latent spaces. http:…
  ☆145Updated 7 months ago
• fhalab / MLDE
  A machine-learning package for navigating combinatorial protein fitness landscapes.
  ☆129Updated 4 years ago
• AbSciBio / unlocking-de-novo-antibody-design
  ☆132Updated last year
• luost26 / diffab
  ✌🏻 Antigen-Specific Antibody Design and Optimization with Diffusion-Based Generative Models for Protein Structures (NeurIPS 2022)
  ☆350Updated 2 years ago
• OATML-Markslab / ProteinNPT
  Official code repository for the paper "ProteinNPT: Improving Protein Property Prediction and Design with Non-Parametric Transformers"
  ☆125Updated 3 weeks ago
• lucidrains / chroma-pytorch
  Implementation of Chroma, generative models of protein using DDPM and GNNs, in Pytorch
  ☆159Updated 2 years ago
• gjoni / trDesign
  trRosetta for protein design
  ☆183Updated 4 years ago
• adaptyvbio / ProteinFlow
  Versatile computational pipeline for processing protein structure data for deep learning applications.
  ☆267Updated last year
• uw-ipd / RoseTTAFold2
  ☆203Updated 7 months ago
• OATML-Markslab / ProteinGym
  Official repository for the ProteinGym benchmarks
  ☆366Updated 4 months ago
• aqlaboratory / rgn2
  ☆108Updated 2 years ago
• a-r-j / ProteinWorkshop
  Benchmarking framework for protein representation learning. Includes a large number of pre-training and downstream task datasets, models …
  ☆258Updated 7 months ago
• BytedProtein / ByProt
  ☆207Updated last year
• ProteinDesignLab / protpardelle
  Diffusion-based all-atom protein generative model.
  ☆227Updated 3 months ago
• evo-design / protein-dpo
  Aligning protein generative models with experimental fitness
  ☆113Updated last month
• ketatam / DiffDock-PP
  Implementation of DiffDock-PP: Rigid Protein-Protein Docking with Diffusion Models in PyTorch (ICLR 2023 - MLDD Workshop)
  ☆225Updated last year
• varun-shanker / structural-evolution
  ☆116Updated last year
• oxpig / AntiFold
  Improved antibody structure-based design using inverse folding
  ☆144Updated 3 months ago
• brianhie / efficient-evolution
  Efficient evolution from protein language models
  ☆217Updated 2 years ago
• chandar-lab / AMPLIFY
  ☆117Updated 4 months ago
• debbiemarkslab / SeqDesign
  Protein design and variant prediction using autoregressive generative models
  ☆117Updated last year
• melobio / EvoPlay
  ☆77Updated 2 years ago
• anton-bushuiev / PPIRef
  Dataset and package for working with protein-protein interactions in 3D
  ☆96Updated 7 months ago
• martinez-zacharya / TRILL
  Sandbox for Deep-Learning based Computational Protein Design
  ☆119Updated 2 weeks ago