Alternatives and similar repositories for LatentDE:

Users that are interested in LatentDE are comparing it to the libraries listed below

• A4Bio / FoldToken_open
  ☆13Updated 3 months ago
• HannesStark / CodonMPNN
  ☆24Updated 2 months ago
• issararab / PEvoLM
  Protein Sequence Evolutionary Information Language Model
  ☆12Updated last year
• gitter-lab / metl-pretrained
  Pretrained METL models with minimal dependencies
  ☆14Updated last week
• amelvim / antibody-diffusion-properties
  Guiding diffusion models for antibody sequence and structure co-design with developability properties.
  ☆31Updated 3 months ago
• pengzhangzhi / Awesome-List-Protein-Binding-Site-Prediction-
  List of papers on protein binding site prediction
  ☆11Updated last year
• bzho3923 / CPDiffusion
  ☆20Updated 4 months ago
• Graylab / MaskedProteinEnT
  ☆11Updated 2 months ago
• KULL-Centre / _2023_Blaabjerg_SSEmb
  ☆33Updated 5 months ago
• compsciencelab / mdCATH
  This repository houses all the scripts and notebooks utilized for generating, analyzing, and validating the mdCATH dataset. Some user ex…
  ☆35Updated 3 months ago
• petergroth / kermut
  This is the official code repository for the paper NeurIPS 2024 spotlight paper "Kermut: Composite kernel regression for protein variant …
  ☆17Updated 2 months ago
• kirjner / GGS
  This repository implements Gibbs sampling with Graph-based Smoothing
  ☆37Updated 8 months ago
• Profluent-Internships / ProCALM
  A conditionally adapted protein language model for the generation of enzymes
  ☆18Updated 2 months ago
• Kuhlman-Lab / PIPPack
  Implementation of Protein Invariant Point Packer (PIPPack)
  ☆32Updated 8 months ago
• sirius777coder / GPDL
  Generative diverse protein backbones by protein language model
  ☆30Updated 2 months ago
• DeepGraphLearning / S3F
  Sequence-Structure-Surface Model for Protein Fitness Prediction (S3F)
  ☆27Updated 2 months ago
• JocelynSong / NAEPro
  ☆12Updated last year
• ShenLab / SeqDance
  code for SeqDance, a biophysics-informed protein language model
  ☆22Updated 3 months ago
• alepandini / DyNoPy
  DyNoPy
  ☆11Updated 5 months ago
• Junjie-Zhu / IDPFold
  IDPFold test version
  ☆18Updated 5 months ago
• HySonLab / Ligand_Generation
  Target-aware Variational Auto-encoders for Ligand Generation with Multimodal Protein Representation Learning
  ☆27Updated 9 months ago
• PeptoneLtd / proteinmpnn_ddg
  Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.
  ☆41Updated 2 months ago
• DeepGraphLearning / esm-s
  Structure-Informed Protein Language Model
  ☆28Updated last year
• tyang816 / VenusREM
  🧬 Augmenting zero-shot mutant prediction by retrieval-based logits fusion.
  ☆34Updated last month
• petergroth / FLOP
  This is the official code repository for the paper FLOP: Tasks for Fitness Landscapes Of Protein wildtypes by Groth et al.
  ☆21Updated last year
• HySonLab / Protein_Redesign
  ProteinReDiff: Complex-based ligand-binding proteins redesign by equivariant diffusion-based generative models
  ☆39Updated 2 months ago
• ohuelab / ColabDesign-cyclic-binder
  ☆31Updated last year