ProteusAI is a library for the machine learning driven engineering of proteins. The library enables workflows from protein structure prediction, prediction of mutational effects to protein ligand interactions powered by artificial intelligence.
☆82Sep 11, 2025Updated 7 months ago
Alternatives and similar repositories for ProteusAI
Users that are interested in ProteusAI are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Metrics for our protein design competitions.☆35Nov 1, 2024Updated last year
- Directed evolution of proteins in sequence space with gradients☆95Oct 18, 2025Updated 6 months ago
- ☆13Dec 5, 2024Updated last year
- A comprehensive benchmark on the performances of multiple protein backbone generative models.☆67Feb 2, 2026Updated 2 months ago
- Protein representation and design under a single training scheme☆24Updated this week
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Adapting protein language models for structure-conditioned design☆42Aug 5, 2024Updated last year
- Official repository for the ProteinGym benchmarks☆420Mar 25, 2026Updated last month
- bioinformatics tools running on modal☆153Feb 18, 2026Updated 2 months ago
- ☆16Mar 28, 2025Updated last year
- Efficient manipulation of protein structures in Python☆67Sep 27, 2025Updated 7 months ago
- Baseline model for PPB-Affinity benchmark data☆37May 21, 2025Updated 11 months ago
- Source code and examples for AlphaFold Unmasked☆78Nov 25, 2025Updated 5 months ago
- This repo contains the results data for Round 2 of EGFR Protein Design Competition.☆19Mar 18, 2025Updated last year
- ☆47Sep 16, 2024Updated last year
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Design data and process for the AdaptyvBio protein design competition☆11Dec 11, 2024Updated last year
- This is the offical codebase to reproduce and use EVOLVEpro, a model for in silico directed evolution of protein activities using few-sho…☆355Jun 11, 2025Updated 10 months ago
- ProteinDesign with RFdiffusion and ProteinMPNN/LigandMPNN☆23Mar 6, 2025Updated last year
- FAPLM: A Drop-in Efficient Pytorch Implementation of Protein Language Models☆167Mar 28, 2026Updated last month
- Protein Engineering via Exploration of an Energy Landscape☆137Mar 10, 2026Updated last month
- Making Protein Language Modeling Accessible to All Biologists☆161Updated this week
- This repo contains the results data for Round 1 of Adaptyv Bio’s EGFR Protein Design Competition.☆37Dec 12, 2024Updated last year
- Protein Design by Machine Learning guided Directed Evolution☆48Jan 1, 2026Updated 3 months ago
- ☆125Feb 1, 2026Updated 2 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- GNN trained to predict changes in thermodynamic stability for protein point mutants☆246Mar 26, 2026Updated last month
- Comprehensive benchmarking of protein-ligand structure prediction methods. (Nature Machine Intelligence)☆225Mar 24, 2026Updated last month
- Improved protein complex prediction with AlphaFold-multimer by denoising the MSA profile☆72Apr 13, 2026Updated 2 weeks ago
- Protein Structure Analysis☆74Mar 21, 2026Updated last month
- Text-guided protein design☆93Mar 30, 2026Updated last month
- Protein structure diffusion model for unconditional protein generation and motif scaffolding☆191Jun 24, 2024Updated last year
- ☆24Jan 15, 2026Updated 3 months ago
- ☆31Dec 12, 2024Updated last year
- LatentDE: Latent-based Directed Evolution for Protein Sequence Design☆38Apr 2, 2025Updated last year
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Pretrained METL models with minimal dependencies