jonfunk21 / ProteusAI
ProteusAI is a library for the machine learning driven engineering of proteins. The library enables workflows from protein structure prediction, prediction of mutational effects to protein ligand interactions powered by artificial intelligence.
☆34Updated this week
Related projects ⓘ
Alternatives and complementary repositories for ProteusAI
- ☆70Updated 6 months ago
- Efficient manipulation of protein structures in Python☆39Updated 2 weeks ago
- ☆38Updated 2 months ago
- ☆42Updated 7 months ago
- Structure prediction of alternative protein conformations☆71Updated 2 months ago
- Generating and scoring novel enzyme sequences with a variety of models and metrics☆62Updated 4 months ago
- Improved antibody structure-based design using inverse folding☆75Updated 2 months ago
- Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.☆33Updated 2 months ago
- Protein Design by Machine Learning guided Directed Evolution☆25Updated 3 months ago
- Exploring the conformational ensembles of protein-protein complexes with transformer-based generative neural networks☆25Updated 5 months ago
- Deep learning framework for protein sequence design from a backbone scaffold that can leverage the molecular context including non-protei…☆34Updated 4 months ago
- TemStaPro - a program for protein thermostability prediction using sequence representations from a protein language model.☆47Updated 7 months ago
- AlphaFold-initiated replica exchange protein docking☆45Updated 3 months ago
- ☆74Updated last month
- Improved protein complex prediction with AlphaFold-multimer by denoising the MSA profile☆64Updated 2 months ago
- Data sharing for High-throughput Prediction of Changes in Protein Conformational Distributions with Subsampled AlphaFold2☆37Updated 6 months ago
- ☆45Updated 3 weeks ago
- ☆17Updated 3 weeks ago
- SaprotHub: Making Protein Modeling Accessible to All Biologists☆69Updated this week
- Controlling the usage of hydrophobic residues on AfDesign for binder peptide design with AlphaFold hallucination protocol☆29Updated last year
- Code for humanization of antibody and nanobody☆23Updated 3 weeks ago
- ☆35Updated 11 months ago
- ☆21Updated 4 months ago
- ☆45Updated 5 months ago
- A domain parser for Alphafold models☆32Updated 11 months ago
- code for SeqDance, a biophysics-informed protein language model☆18Updated 3 weeks ago
- Fast and accurate protein domain segmentation using Invariant Point Attention☆26Updated 3 weeks ago
- Metrics for our protein design competitions.☆15Updated 3 weeks ago
- Template-based protein design with Raygun☆44Updated 2 weeks ago