programmablebio / saltnpeppr

Related projects ⓘ

Alternatives and complementary repositories for saltnpeppr

• PeptoneLtd / proteinmpnn_ddg
  Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.
  ☆33Updated 2 months ago
• amyguo1997 / dynamic_protein_design
  Code for deep learning guided design of dynamic proteins
  ☆17Updated 4 months ago
• sirius777coder / GPDL
  Generative diverse protein backbones by protein language model
  ☆24Updated last week
• CongLabCode / RoseTTAFold2-PPI
  Fast deep learning methods for large-scale protein-protein interaction screening
  ☆24Updated last month
• matteoferla / pyrosetta-help
  Some scripts that I keep using over and over.
  ☆18Updated 8 months ago
• KULL-Centre / _2024_cagiada_stability
  ☆45Updated last month
• KULL-Centre / _2023_Blaabjerg_SSEmb
  ☆22Updated 2 months ago
• WangLabforComputationalBiology / NanoBERTa-ASP
  Predicting Nanobody Binding Epitopes Based on a Pretrained RoBERTa-based Model
  ☆13Updated 5 months ago
• issararab / PEvoLM
  Protein Sequence Evolutionary Information Language Model
  ☆12Updated last year
• RitAreaSciencePark / PLM4Muts
  ☆8Updated 3 weeks ago
• SimonKitSangChu / EsmTherm
  ☆10Updated 6 months ago
• amelvim / antibody-diffusion-properties
  Guiding diffusion models for antibody sequence and structure co-design with developability properties.
  ☆26Updated 2 weeks ago
• CSB-KaracaLab / prot-on
  This repo contains the collection of codes to find designer interfacial mutations
  ☆16Updated last year
• 3BioCompBio / pyScoMotif
  Python tool for the discovery of similar 3D structural motifs across protein structures.
  ☆25Updated last year
• jsunn-y / ALDE
  Active Learning-Assisted Directed Evolution for Protein Engineering
  ☆25Updated this week
• ak422 / DDAffinity
  ☆12Updated 2 months ago
• jsunn-y / CARE
  CARE: a Benchmark Suite for the Classification and Retrieval of Enzymes
  ☆24Updated 3 weeks ago
• haddocking / arctic3d
  Automatic Retrieval and ClusTering of Interfaces in Complexes from 3D structural information
  ☆27Updated last week
• gitter-lab / metl-pretrained
  Pretrained METL models with minimal dependencies
  ☆13Updated 2 weeks ago
• alepandini / DyNoPy
  DyNoPy
  ☆11Updated 2 months ago
• oxpig / AbLang2
  An antibody-specific language model focusing on NGL prediction
  ☆21Updated 3 months ago
• seanrjohnson / protein_scoring
  Generating and scoring novel enzyme sequences with a variety of models and metrics
  ☆62Updated 4 months ago
• Graylab / MaskedProteinEnT
  ☆11Updated last month
• ohuelab / MEGADOCK-on-Colab
  MEGADOCK on Google Colaboratory
  ☆14Updated last year
• maltesie / bridge2
  GUI for interactive graph-based analyses of hydrogen bond networks in crystal structures and MD trajectories.
  ☆9Updated last year
• LPDI-EPFL / masif-neosurf
  MaSIF-neosurf: surface-based protein design for ternary complexes.
  ☆25Updated 2 weeks ago
• Andre-lab / evodock
  A Memetic Algorithm boosts accuracy and speed of all-atom protein-protein docking
  ☆24Updated 7 months ago
• DeepGraphLearning / esm-s
  Structure-Informed Protein Language Model
  ☆26Updated 9 months ago
• pepamengual / UEP
  ☆9Updated last year