westlake-repl / SaprotHub
Making Protein Modeling Accessible to All Biologists
☆106Updated this week
Alternatives and similar repositories for SaprotHub:
Users that are interested in SaprotHub are comparing it to the libraries listed below
- ☆111Updated last month
- Generative Language Modeling for Antibody Design☆146Updated 6 months ago
- Protein folding in Pymol☆108Updated 3 months ago
- Official repository of EnzymeFlow☆85Updated 4 months ago
- Code for ProSST: A Pre-trained Protein Sequence and Structure Transformer with Disentangled Attention.☆112Updated last month
- ProTrek: Navigating the Protein Universe through Tri-Modal Contrastive Learning☆99Updated this week
- Pro-FSFP: Few-Shot Protein Fitness Prediction☆80Updated 3 months ago
- open source code for Tencent tFold☆95Updated last month
- GNN trained to predict changes in thermodynamic stability for protein point mutants☆160Updated 2 months ago
- ☆101Updated 9 months ago
- A compilation of deep learning methods for protein design☆97Updated 2 years ago
- ☆54Updated 3 months ago
- ☆91Updated 5 months ago
- Code for ColabDock paper☆137Updated 6 months ago
- Zero-shot prediction of mutation effects on protein function with multimodal deep representation learning☆57Updated 10 months ago
- ☆121Updated 6 months ago
- PLM based active learning model for protein engineering☆77Updated 8 months ago
- Predict multiple protein conformations using sequence clustering and AlphaFold2.☆153Updated last month
- Official code repository for the paper "ProteinNPT: Improving Protein Property Prediction and Design with Non-Parametric Transformers"☆111Updated last month
- Improved antibody structure-based design using inverse folding☆110Updated last month
- The official implementation of DiffAbXL benchmarked in the paper "Exploring Log-Likelihood Scores for Ranking Antibody Sequence Designs",…☆68Updated 5 months ago
- Tutorials, cheat sheets, and other resources for computational methods for protein design.☆110Updated last year
- Predict the structure of immune receptor proteins☆133Updated 2 months ago
- MaSIF-neosurf: surface-based protein design for ternary complexes.☆112Updated 3 weeks ago
- Fitness landscapes for antibodies☆68Updated 3 months ago
- Official implementation of Generative Diffusion Models for Antibody Design, Docking, and Optimization.☆58Updated last year
- Convenience Python APIs for antibody numbering using ANARCI☆94Updated 2 months ago
- ☆77Updated last month
- Masif seed paper repository☆149Updated last year
- PocketGen (Nature Machine Intelligence 24): Generating Full-Atom Ligand-Binding Protein Pockets☆176Updated this week