Alternatives and similar repositories for DSM

Users that are interested in DSM are comparing it to the libraries listed below

• stracquadaniolab / prevent-nf
  PREVENT: PRotein Engineering by Variational frEe eNergy approximaTion
  ☆12Updated last year
• ai4protein / VenusX
  ☆13Updated 3 months ago
• zanderharteveld / genesis
  protein backbone refinement
  ☆15Updated 11 months ago
• sirius777coder / GPDL
  Generative diverse protein backbones by protein language model
  ☆33Updated 8 months ago
• johnyang101 / pmpnndiff
  Repository for Fast Non-autoregressive Inverse Folding with Discrete Diffusion
  ☆17Updated last year
• mjendrusch / salad
  protein structure generation with sparse all-atom denoising models
  ☆35Updated 3 weeks ago
• gitter-lab / metl-pretrained
  Pretrained METL models with minimal dependencies
  ☆15Updated 3 months ago
• GradinaruLab / APPRAISE
  Rank binders by structure modeling
  ☆16Updated 5 months ago
• Lailabcode / DeepViscosity
  DeepViscosity is a deep learning ANN model developed to predict high concentrated monoclonal antibody viscosity classes (Low <= 20cps, Hi…
  ☆15Updated 3 weeks ago
• JocelynSong / NAEPro
  ☆12Updated last year
• lehner-lab / domainome
  ☆15Updated 8 months ago
• mgreenig / IgCraft
  Versatile human antibody sequence design
  ☆18Updated 3 months ago
• programmablebio / saltnpeppr
  An Interface-Predicting Language Model for Designing Peptide-Guided Protein Degraders
  ☆16Updated 11 months ago
• meilerlab / probabilities_design
  ☆14Updated 5 months ago
• Profluent-Internships / ProCALM
  A conditionally adapted protein language model for the generation of enzymes
  ☆22Updated 9 months ago
• violet-sto / Bridge-IF
  Official implementation of NeurIPS'24 paper "Bridge-IF: Learning Inverse Protein Folding with Markov Bridges"
  ☆15Updated 5 months ago
• HannesStark / CodonMPNN
  ☆28Updated 8 months ago
• rdkibler / superfold
  ☆13Updated 3 months ago
• ai4protein / VenusMine
  ☆28Updated 2 months ago
• flagshippioneering / pi-rldif
  Code for RL-DIF
  ☆16Updated 2 months ago
• Merck / AbLEF
  Antibody Langauge Ensemble Fusion - fuses antibody structural ensemble and language representation for property prediction
  ☆12Updated last year
• davidekim / parametric_barrels
  ☆13Updated 6 months ago
• HySonLab / LatentDE
  LatentDE: Latent-based Directed Evolution for Protein Sequence Design
  ☆36Updated 4 months ago
• alirezaomidi / AFM-IDR
  Official repo for paper "AlphaFold-Multimer accurately captures interactions and dynamics of intrinsically disordered protein regions"
  ☆16Updated 8 months ago
• 3BioCompBio / pyScoMotif
  Python tool for the discovery of similar 3D structural motifs across protein structures.
  ☆30Updated last year
• SimonKitSangChu / EsmTherm
  ☆13Updated last year
• matsagad / mres-project
  Conditioning diffusion models for scaffolding protein motifs. A repository for my master's dissertation.
  ☆10Updated 8 months ago
• strauchlab / scaffold_design
  ☆18Updated last year
• KoubaPetr / Flexpert
  Code for the paper "Learning to engineer protein flexibility".
  ☆19Updated last month
• matteoferla / pyrosetta-help
  Some scripts that I keep using over and over.
  ☆19Updated last month