Alternatives and similar repositories for DSM

Users that are interested in DSM are comparing it to the libraries listed below

• rdilip / kanzi
  ☆29Updated 2 months ago
• GradinaruLab / APPRAISE
  Rank binders by structure modeling
  ☆16Updated 10 months ago
• meilerlab / probabilities_design
  ☆15Updated 10 months ago
• zanderharteveld / genesis
  protein backbone refinement
  ☆15Updated last year
• johnyang101 / pmpnndiff
  Repository for Fast Non-autoregressive Inverse Folding with Discrete Diffusion
  ☆18Updated 2 years ago
• lehner-lab / domainome
  ☆16Updated last year
• sirius777coder / GPDL
  Generative diverse protein backbones by protein language model
  ☆34Updated 3 months ago
• davidekim / parametric_barrels
  Utility scripts to generate and evaluate parametrically guided beta barrel protein backbone structures.
  ☆14Updated 2 months ago
• Profluent-Internships / ProCALM
  A conditionally adapted protein language model for the generation of enzymes
  ☆23Updated last year
• programmablebio / saltnpeppr
  An Interface-Predicting Language Model for Designing Peptide-Guided Protein Degraders
  ☆16Updated last year
• amyguo1997 / dynamic_protein_design
  Code for deep learning guided design of dynamic proteins
  ☆32Updated last year
• ai4protein / VenusX
  ☆16Updated 4 months ago
• stracquadaniolab / prevent-nf
  PREVENT: PRotein Engineering by Variational frEe eNergy approximaTion
  ☆13Updated last year
• violet-sto / Bridge-IF
  Official implementation of NeurIPS'24 paper "Bridge-IF: Learning Inverse Protein Folding with Markov Bridges"
  ☆18Updated 10 months ago
• rdkibler / superfold
  ☆15Updated 4 months ago
• 3BioCompBio / pyScoMotif
  Python tool for the discovery of similar 3D structural motifs across protein structures.
  ☆34Updated 2 years ago
• scdantu / pycom
  ☆11Updated 9 months ago
• matteoferla / pyrosetta-help
  Some scripts that I keep using over and over.
  ☆21Updated 7 months ago
• HySonLab / LatentDE
  LatentDE: Latent-based Directed Evolution for Protein Sequence Design
  ☆37Updated 10 months ago
• HannesStark / CodonMPNN
  ☆30Updated last year
• issararab / PEvoLM
  Protein Sequence Evolutionary Information Language Model
  ☆13Updated 2 years ago
• gitter-lab / metl-pretrained
  Pretrained METL models with minimal dependencies
  ☆16Updated 4 months ago
• strauchlab / scaffold_design
  ☆18Updated last year
• vendruscolo-lab / AlphaFold-IDP
  This repository provides with custom code and analysis scripts to generate structural ensembles of intrinsically disordered proteins by u…
  ☆19Updated 3 months ago
• matmi8 / Zernike2D
  ☆10Updated 9 months ago
• alepandini / DyNoPy
  DyNoPy
  ☆11Updated last year
• THGLab / int2cart
  Building more accurate protein structures from backbone torsion angles
  ☆14Updated 10 months ago
• mjendrusch / salad
  protein structure generation with sparse all-atom denoising models
  ☆57Updated last month
• sokrypton / roscon2024
  Tutorial files
  ☆12Updated last year
• RosettaCommons / demos
  Demos of many Rosetta applications
  ☆20Updated 7 months ago