Alternatives and similar repositories for fampnn

Users that are interested in fampnn are comparing it to the libraries listed below

• Wangchentong / Proteus
  Pytorch implementation for ICML 2024 paper Proteus: Exploring Protein Structure Generation for Enhanced Designability and Efficiency.
  ☆85Updated last year
• YuzheWangPKU / DiffPepBuilder
  Official repository for DiffPepBuilder and DiffPepDock tools
  ☆114Updated 3 months ago
• Mingchenchen / AF3Score
  A Score-Only Adaptation of AlphaFold3 for Biomolecular Structure Evaluation
  ☆102Updated this week
• wengong-jin / DSMBind
  ☆96Updated last year
• bcov77 / silent_tools
  A bunch of shell utilities for dealing the silent files
  ☆75Updated 3 weeks ago
• baker-laboratory / CA_RFDiffusion
  ☆76Updated 7 months ago
• meilerlab / HyperMPNN
  HyperMPNN ‒ A general strategy to design thermostable proteins learned from hyperthermophiles
  ☆70Updated 6 months ago
• ELELAB / RosettaDDGPrediction
  ☆84Updated 2 months ago
• levinthal / Pallatom
  ☆134Updated 7 months ago
• bunzela / AIzymes
  ☆65Updated 3 months ago
• mabr3112 / riff_diff_protflow
  ProtFlow Implementation of the RiffDiff pipeline to design enzymes from theozymes.
  ☆71Updated last month
• Kuhlman-Lab / evopro
  ☆94Updated 3 months ago
• Profluent-AI / E1
  Profluent-E1 family of Protein Encoder Models
  ☆98Updated 2 months ago
• yehlincho / BoltzDesign1
  ☆235Updated 5 months ago
• pengzhangzhi / ab_opt
  Official implementation of Generative Diffusion Models for Antibody Design, Docking, and Optimization.
  ☆60Updated 2 years ago
• amyxlu / plaid
  All-atom protein generation using latent diffusion, with compositional function and taxonomic prompts. http://bit.ly/plaid-proteins
  ☆116Updated 7 months ago
• TencentAI4S / HuDiff
  Code for humanization of antibody and nanobody
  ☆70Updated 4 months ago
• WillHua127 / EnzymeFlow
  Official repository of EnzymeFlow
  ☆97Updated last year
• A-Alpha-Bio / alphabind
  AlphaBind code + model accompanying pre-print
  ☆89Updated 6 months ago
• WillHua127 / GENzyme
  Official repository of GENzyme
  ☆60Updated last year
• liuyf020419 / SCUBA-D
  ☆61Updated last year
• stebliankin / piston
  Evaluating Protein Binding Interfaces with Transformer Networks
  ☆47Updated 2 years ago
• ikalvet / invrotzyme
  Utility for building inverse rotamer assemblies out of a Rosetta matcher/enzdes constraint file.
  ☆26Updated 10 months ago
• alexechu / protpardelle
  ☆64Updated 2 years ago
• bytedance / Protenix-Dock
  An accurate and trainable end-to-end protein-ligand docking framework
  ☆118Updated 10 months ago
• LPDI-EPFL / masif-neosurf
  MaSIF-neosurf: surface-based protein design for ternary complexes.
  ☆163Updated last month
• escalante-bio / mosaic
  composite-objective protein design
  ☆185Updated this week
• zhanghaicang / carbonmatrix_public
  ☆119Updated 3 weeks ago
• Wublab / Pythia
  Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutations
  ☆91Updated last month
• HBioquant / DiffBindFR
  Diffusion model based protein-ligand flexible docking method
  ☆116Updated last year