Template-based protein design with Raygun
☆151Jul 30, 2026Updated last month
Alternatives and similar repositories for raygun
Users that are interested in raygun are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Official repository for DiffPepBuilder and DiffPepDock tools☆132Oct 24, 2025Updated 10 months ago
- Protein Sequence Evolutionary Information Language Model☆14Oct 5, 2023Updated 2 years ago
- Utility scripts to generate and evaluate parametrically guided beta barrel protein backbone structures.☆13Nov 14, 2025Updated 9 months ago
- Directed evolution of proteins in sequence space with gradients☆97Oct 18, 2025Updated 10 months ago
- ☆139Jul 12, 2024Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Iterative masking algorithm on MSA Transformer to generate synthetic sequences☆30Jan 17, 2024Updated 2 years ago
- Geometric deep learning method to predict protein binding interfaces from a protein structure.☆170Oct 11, 2023Updated 2 years ago
- ☆47Sep 16, 2024Updated last year
- random colab notebooks for biology☆26Aug 23, 2025Updated last year
- Protein structure diffusion model for unconditional protein generation and motif scaffolding☆195Jun 24, 2024Updated 2 years ago
- All-atom protein generation using latent diffusion, with compositional function and taxonomic prompts. http://bit.ly/plaid-proteins☆126May 27, 2025Updated last year
- Code for deep learning guided design of dynamic proteins☆35Jul 16, 2024Updated 2 years ago
- ☆101Jul 24, 2026Updated last month
- protein backbone refinement☆16Sep 12, 2024Updated last year
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Structure-conditioned masked language modeling for protein sequence design☆74Jan 31, 2024Updated 2 years ago
- ☆13Aug 30, 2025Updated last year
- Sidechain conditioning and modeling for full-atom protein sequence design☆149Nov 11, 2025Updated 9 months ago
- HalluDesign, a hallucination-driven all-atom framework for the iterative co-optimization and co-design of protein sequences and structure…☆90Jul 23, 2026Updated last month
- Aligning protein generative models with experimental fitness☆148Mar 12, 2026Updated 5 months ago
- Structure prediction and design of proteins with noncanonical amino acids☆146Feb 1, 2026Updated 7 months ago
- Diffusion-based all-atom protein generative model.☆239Aug 27, 2025Updated last year
- Multiple Protein Structure Alignment at Scale with FoldMason☆281May 11, 2026Updated 3 months ago
- Finding patch of conserved amino acid sites in 3D structure☆14Apr 13, 2025Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- In silico directed evolution of peptide binders with AlphaFold☆278Aug 27, 2026Updated last week
- ☆21Oct 26, 2024Updated last year
- Feynman-Kac steering for controllable protein diffusion☆38Aug 16, 2026Updated 3 weeks ago
- This repository houses all the scripts and notebooks utilized for generating, analyzing, and validating the mdCATH dataset. Some user ex…☆63Dec 16, 2025Updated 8 months ago
- AlphaBind code + model accompanying pre-print☆94Jul 24, 2025Updated last year
- Joint sequence and structure generation with RoseTTAFold sequence space diffusion☆332Oct 28, 2024Updated last year
- A conditionally adapted protein language model for the generation of enzymes☆24Nov 26, 2024Updated last year
- ☆17Mar 26, 2024Updated 2 years ago
- Gibbs sampling for generating protein sequences☆59Jan 17, 2025Updated last year
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Generating and scoring novel enzyme sequences with a variety of models and metrics☆72Feb 21, 2026Updated 6 months ago
- Neural Iterative Selection-Expansion using LigandMPNN/LASErMPNN and Boltz-2x☆68Aug 11, 2026Updated 3 weeks ago
- Updated Protpardelle models with more robust motif scaffolding and multichain support☆83May 1, 2026Updated 4 months ago
- Protein Sequence Design with Deep Learning and Tooling like Monte Carlo Sampling and Analysis☆62Oct 28, 2025Updated 10 months ago
- mBER - Manifold Binder Engineering and Refinement. mBER enables antibody binder design by leveraging structure templates and sequence con…☆143Apr 27, 2026Updated 4 months ago
- MAGPIE☆17May 5, 2024Updated 2 years ago
- Fast protein structure searching or your money back☆119Apr 13, 2026Updated 4 months ago