rohitsinghlab / raygunLinks
Template-based protein design with Raygun
☆73Updated last month
Alternatives and similar repositories for raygun
Users that are interested in raygun are comparing it to the libraries listed below
Sorting:
- ☆47Updated 9 months ago
- ProteusAI is a library for the machine learning driven engineering of proteins. The library enables workflows from protein structure pred…☆63Updated 3 weeks ago
- ☆71Updated 6 months ago
- Fast deep learning methods for large-scale protein-protein interaction screening☆75Updated 2 months ago
- Learning the language of protein-protein interactions☆98Updated 2 weeks ago
- Local Interaction Score (LIS) Calculation from AlphaFold-Multimer (Enhanced Protein-Protein Interaction Discovery via AlphaFold-Multimer)☆58Updated 6 months ago
- Generating and scoring novel enzyme sequences with a variety of models and metrics☆71Updated 3 months ago
- Improved protein complex prediction with AlphaFold-multimer by denoising the MSA profile☆69Updated last year
- AlphaFold-initiated replica exchange protein docking☆84Updated 4 months ago
- Metrics for our protein design competitions.☆35Updated 11 months ago
- AlphaLink2: Integrating crosslinking MS data into Uni-Fold-Multimer☆58Updated last month
- Source code and examples for AlphaFold Unmasked☆74Updated 2 weeks ago
- Efficient manipulation of protein structures in Python☆58Updated last week
- ☆86Updated last year
- Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutations☆66Updated 2 months ago
- Results and data from the pilot round of the Protein Engineering Tournament☆30Updated 6 months ago
- Inference code for PoET: A generative model of protein families as sequences-of-sequences☆80Updated last year
- ☆88Updated 2 months ago
- Fast indexing and search of discontinuous motifs in protein structures☆86Updated last week
- Neural networks to fit interpretable models and quantify energies, energetic couplings, epistasis, and allostery from deep mutational sca…☆54Updated 6 months ago
- Mutational Effect Transfer Learning (METL) framework for pretraining and finetuning biophysics-informed protein language models☆54Updated 3 weeks ago
- PLM based active learning model for protein engineering☆83Updated last year
- Codebase for Germinal, a broadly enabling generative pipeline for efficient generation of epitope-targeted de novo antibodies.☆125Updated this week
- ☆53Updated last month
- ☆44Updated last year
- Structure prediction of alternative protein conformations☆79Updated 7 months ago
- Fragment binding prediction with ColabFold☆37Updated 6 months ago
- Directed evolution of proteins in sequence space with gradients☆91Updated last year
- Active Learning-Assisted Directed Evolution for Protein Engineering☆66Updated 10 months ago
- ☆21Updated 11 months ago