rohitsinghlab / raygunLinks
Template-based protein design with Raygun
☆76Updated last week
Alternatives and similar repositories for raygun
Users that are interested in raygun are comparing it to the libraries listed below
Sorting:
- ProteusAI is a library for the machine learning driven engineering of proteins. The library enables workflows from protein structure pred…☆66Updated 4 months ago
- Learning the language of protein-protein interactions☆124Updated 2 weeks ago
- ☆72Updated 10 months ago
- Generating and scoring novel enzyme sequences with a variety of models and metrics☆72Updated last month
- ☆47Updated last year
- PLM based active learning model for protein engineering☆84Updated last year
- ☆56Updated 5 months ago
- AlphaFold-initiated replica exchange protein docking☆87Updated 7 months ago
- Efficient manipulation of protein structures in Python☆61Updated 4 months ago
- Results and data from the pilot round of the Protein Engineering Tournament☆30Updated 10 months ago
- Metrics for our protein design competitions.☆35Updated last year
- Fast indexing and search of discontinuous motifs in protein structures☆112Updated last week
- ☆21Updated last year
- Local Interaction Score (LIS) Calculation from AlphaFold-Multimer (Enhanced Protein-Protein Interaction Discovery via AlphaFold-Multimer)…☆63Updated 2 months ago
- ☆47Updated last year
- Improved protein complex prediction with AlphaFold-multimer by denoising the MSA profile☆72Updated last year
- ☆90Updated last year
- ☆94Updated 3 months ago
- AlphaLink2: Integrating crosslinking MS data into Uni-Fold-Multimer☆62Updated 5 months ago
- Protein Design by Machine Learning guided Directed Evolution☆46Updated 3 weeks ago
- ☆32Updated last year
- One protein is all you need☆64Updated last month
- Scripts to run AlphaFold3, Boltz-1 and Chai-1 with MMseqs2 MSAs and custom templates.☆101Updated 2 weeks ago
- Neural networks to fit interpretable models and quantify energies, energetic couplings, epistasis, and allostery from deep mutational sca…☆55Updated 9 months ago
- Machine learning prediction of enzyme optimum pH☆50Updated 9 months ago
- Inference code for PoET: A generative model of protein families as sequences-of-sequences☆91Updated last year
- Fast deep learning methods for large-scale protein-protein interaction screening☆115Updated 5 months ago
- Parametric Building of de novo Functional Topologies☆44Updated 3 years ago
- Mutational Effect Transfer Learning (METL) framework for pretraining and finetuning biophysics-informed protein language models☆60Updated 3 months ago
- Fast and accurate protein domain segmentation using Invariant Point Attention☆44Updated 8 months ago