Template-based protein design with Raygun
☆84Apr 12, 2026Updated 3 months ago
Alternatives and similar repositories for raygun
Users that are interested in raygun are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Official repository for DiffPepBuilder and DiffPepDock tools☆127Oct 24, 2025Updated 9 months ago
- Protein Sequence Evolutionary Information Language Model☆14Oct 5, 2023Updated 2 years ago
- Utility scripts to generate and evaluate parametrically guided beta barrel protein backbone structures.☆13Nov 14, 2025Updated 8 months ago
- Directed evolution of proteins in sequence space with gradients☆96Oct 18, 2025Updated 9 months ago
- ☆136Jul 12, 2024Updated 2 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Iterative masking algorithm on MSA Transformer to generate synthetic sequences☆30Jan 17, 2024Updated 2 years ago
- Geometric deep learning method to predict protein binding interfaces from a protein structure.☆163Oct 11, 2023Updated 2 years ago
- ☆47Sep 16, 2024Updated last year
- random colab notebooks for biology☆26Aug 23, 2025Updated 11 months ago
- Protein structure diffusion model for unconditional protein generation and motif scaffolding☆193Jun 24, 2024Updated 2 years ago
- All-atom protein generation using latent diffusion, with compositional function and taxonomic prompts. http://bit.ly/plaid-proteins☆127May 27, 2025Updated last year
- Code for deep learning guided design of dynamic proteins☆33Jul 16, 2024Updated 2 years ago
- ☆98Updated this week
- protein backbone refinement☆15Sep 12, 2024Updated last year
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Structure-conditioned masked language modeling for protein sequence design☆73Jan 31, 2024Updated 2 years ago
- ☆13Aug 30, 2025Updated 10 months ago
- Sidechain conditioning and modeling for full-atom protein sequence design☆144Nov 11, 2025Updated 8 months ago
- HalluDesign, a hallucination-driven all-atom framework for the iterative co-optimization and co-design of protein sequences and structure…☆86Updated this week
- Aligning protein generative models with experimental fitness☆124Mar 12, 2026Updated 4 months ago
- Structure prediction and design of proteins with noncanonical amino acids☆139Feb 1, 2026Updated 5 months ago
- Diffusion-based all-atom protein generative model.☆237Aug 27, 2025Updated 11 months ago
- Multiple Protein Structure Alignment at Scale with FoldMason☆281May 11, 2026Updated 2 months ago
- Finding patch of conserved amino acid sites in 3D structure☆14Apr 13, 2025Updated last year
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- In silico directed evolution of peptide binders with AlphaFold☆274Apr 24, 2026Updated 3 months ago
- ☆21Oct 26, 2024Updated last year
- Feynman-Kac steering for controllable protein diffusion☆37Jan 14, 2026Updated 6 months ago
- This repository houses all the scripts and notebooks utilized for generating, analyzing, and validating the mdCATH dataset. Some user ex…☆62Dec 16, 2025Updated 7 months ago
- AlphaBind code + model accompanying pre-print☆92Jul 24, 2025Updated last year
- Joint sequence and structure generation with RoseTTAFold sequence space diffusion☆333Oct 28, 2024Updated last year
- A conditionally adapted protein language model for the generation of enzymes☆24Nov 26, 2024Updated last year
- ☆17Mar 26, 2024Updated 2 years ago
- Gibbs sampling for generating protein sequences☆58Jan 17, 2025Updated last year
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Generating and scoring novel enzyme sequences with a variety of models and metrics☆72Feb 21, 2026Updated 5 months ago
- Neural Iterative Selection-Expansion using LigandMPNN/LASErMPNN and Boltz-2x☆62Jul 14, 2026Updated 2 weeks ago
- Updated Protpardelle models with more robust motif scaffolding and multichain support☆83May 1, 2026Updated 2 months ago
- Protein Sequence Design with Deep Learning and Tooling like Monte Carlo Sampling and Analysis☆62Oct 28, 2025Updated 9 months ago
- mBER - Manifold Binder Engineering and Refinement. mBER enables antibody binder design by leveraging structure templates and sequence con…☆141Apr 27, 2026Updated 3 months ago
- MAGPIE☆17May 5, 2024Updated 2 years ago
- Fast protein structure searching or your money back☆119Apr 13, 2026Updated 3 months ago