GNN trained to predict changes in thermodynamic stability for protein point mutants
☆265Mar 26, 2026Updated 5 months ago
Alternatives and similar repositories for ThermoMPNN
Users that are interested in ThermoMPNN are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Extension of ThermoMPNN for double mutant predictions☆66Mar 23, 2026Updated 5 months ago
- ☆628Feb 6, 2025Updated last year
- Inference code for RFdiffusion2☆440Apr 3, 2026Updated 4 months ago
- Protein stability prediction using rewired protein generative models☆92Jul 15, 2026Updated last month
- Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutations☆116Apr 15, 2026Updated 4 months ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- User friendly and accurate binder design pipeline☆1,200Aug 12, 2026Updated 3 weeks ago
- Official repository for the ProteinGym benchmarks☆469Mar 25, 2026Updated 5 months ago
- Code for the ProteinMPNN paper☆1,838Aug 14, 2024Updated 2 years ago
- HyperMPNN ‒ A general strategy to design thermostable proteins learned from hyperthermophiles☆83Jul 2, 2025Updated last year
- ☆34Feb 5, 2025Updated last year
- This is the offical codebase to reproduce and use EVOLVEpro, a model for in silico directed evolution of protein activities using few-sho…☆376Jun 11, 2025Updated last year
- Public RFDiffusionAA repo☆486Jul 9, 2024Updated 2 years ago
- ☆101Jul 24, 2026Updated last month
- Diffusion-based all-atom protein generative model.☆238Aug 27, 2025Updated last year
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Sidechain conditioning and modeling for full-atom protein sequence design☆149Nov 11, 2025Updated 9 months ago
- 🧬 Augmenting zero-shot mutant prediction by retrieval-based logits fusion. (ISMB/ECCB 2025)☆145Apr 25, 2026Updated 4 months ago
- Making Protein Design accessible to all via Google Colab!☆937Updated this week
- BoltzGen: Toward Universal Binder Design☆1,046May 28, 2026Updated 3 months ago
- Official code repository for the paper "ProteinNPT: Improving Protein Property Prediction and Design with Non-Parametric Transformers"☆135Nov 19, 2025Updated 9 months ago
- ☆416Aug 7, 2024Updated 2 years ago
- Official Implementation of IgGM☆223May 28, 2026Updated 3 months ago
- Aligning protein generative models with experimental fitness☆145Mar 12, 2026Updated 5 months ago
- Potts model-based protein sequence design☆111Jul 1, 2026Updated 2 months ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Codebase for Germinal, a broadly enabling generative pipeline for efficient generation of epitope-targeted de novo antibodies.☆282Apr 24, 2026Updated 4 months ago
- Official repository for DiffPepBuilder and DiffPepDock tools☆131Oct 24, 2025Updated 10 months ago
- ☆55Apr 1, 2025Updated last year
- Scoring methods for predicting the DDG upon protein mutation☆17Feb 20, 2023Updated 3 years ago
- Joint sequence and structure generation with RoseTTAFold sequence space diffusion☆332Oct 28, 2024Updated last year
- Official repository of PXDesign☆251Dec 31, 2025Updated 8 months ago
- A generative model for programmable protein design☆829Apr 11, 2024Updated 2 years ago
- Generating and scoring novel enzyme sequences with a variety of models and metrics☆72Feb 21, 2026Updated 6 months ago
- ☆47Sep 16, 2024Updated last year
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Target Sequence-Conditioned Generation of Peptide Binders via Masked Language Modeling☆132Oct 30, 2025Updated 10 months ago
- ☆145Jun 3, 2025Updated last year
- A Unified Evaluation Suite for Protein Design☆139Jan 27, 2026Updated 7 months ago
- Structure-conditioned masked language modeling for protein sequence design☆74Jan 31, 2024Updated 2 years ago
- Code for humanization of antibody and nanobody☆94Aug 28, 2025Updated last year
- PLACER is graph neural network for local prediction of protein-ligand conformational ensembles.☆263Nov 5, 2025Updated 9 months ago
- ☆218Sep 24, 2024Updated last year