ProteinDesignLab / protpardelleLinks
Diffusion-based all-atom protein generative model.
☆229Updated 5 months ago
Alternatives and similar repositories for protpardelle
Users that are interested in protpardelle are comparing it to the libraries listed below
Sorting:
- GNN trained to predict changes in thermodynamic stability for protein point mutants☆224Updated 6 months ago
- ☆207Updated 9 months ago
- Implementation of DiffDock-PP: Rigid Protein-Protein Docking with Diffusion Models in PyTorch (ICLR 2023 - MLDD Workshop)☆227Updated 2 years ago
- PINDER: The Protein INteraction Dataset and Evaluation Resource☆147Updated last year
- A generalized computational framework for biomolecular modeling.☆395Updated last month
- Inference code for RFdiffusion2☆390Updated 2 months ago
- ☆236Updated this week
- Protein-ligand structure prediction☆238Updated 6 months ago
- Protein Ligand INteraction Dataset and Evaluation Resource☆271Updated 2 months ago
- Joint embedding of protein sequence and structure with discrete and continuous compressions of protein folding model latent spaces. http:…☆147Updated 9 months ago
- ☆133Updated 8 months ago
- ✌🏻 Antigen-Specific Antibody Design and Optimization with Diffusion-Based Generative Models for Protein Structures (NeurIPS 2022)☆352Updated 2 years ago
- ☆212Updated last year
- PocketGen (Nature Machine Intelligence 24): Generating Full-Atom Ligand-Binding Protein Pockets☆207Updated 9 months ago
- composite-objective protein design☆233Updated this week
- PLACER is graph neural network for local prediction of protein-ligand conformational ensembles.☆222Updated 3 months ago
- Protein hallucination and inpainting with RoseTTAFold☆277Updated 2 years ago
- DockQ is a single continuous quality measure for Protein, Nucleic Acids and Small Molecule Docking Models☆360Updated 3 months ago
- Comprehensive benchmarking of protein-ligand structure prediction methods. (Nature Machine Intelligence)☆205Updated last month
- repo for DynamicBind: Predicting ligand-specific protein-ligand complex structure with a deep equivariant generative model☆282Updated last month
- Masif seed paper repository☆173Updated 4 months ago
- ☆146Updated 6 months ago
- NeuralPLexer: State-specific protein-ligand complex structure prediction with a multi-scale deep generative model☆320Updated 4 months ago
- Proteina is a new large-scale flow-based protein backbone generator that utilizes hierarchical fold class labels for conditioning and rel…☆233Updated 6 months ago
- Joint sequence and structure generation with RoseTTAFold sequence space diffusion☆326Updated last year
- Benchmarking framework for protein representation learning. Includes a large number of pre-training and downstream task datasets, models …☆266Updated 9 months ago
- Generative Language Modeling for Antibody Design☆180Updated last year
- De Novo Protein Design by Equivariantly Diffusing Oriented Residue Clouds☆184Updated last year
- Official Implementation of IgGM☆177Updated 2 months ago
- MaSIF-neosurf: surface-based protein design for ternary complexes.☆165Updated 2 months ago