Diffusion-based all-atom protein generative model.
☆239Aug 27, 2025Updated last year
Alternatives and similar repositories for protpardelle
Users that are interested in protpardelle are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆145Jun 3, 2025Updated last year
- Implementation for SE(3) diffusion model with application to protein backbone generation☆425Jul 3, 2023Updated 3 years ago
- Sidechain conditioning and modeling for full-atom protein sequence design☆150Nov 11, 2025Updated 10 months ago
- Public RFDiffusionAA repo☆489Jul 9, 2024Updated 2 years ago
- Pytorch implementation for ICML 2024 paper Proteus: Exploring Protein Structure Generation for Enhanced Designability and Efficiency.☆90Jun 23, 2024Updated 2 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Joint sequence and structure generation with RoseTTAFold sequence space diffusion☆332Oct 28, 2024Updated last year
- AlphaFold Meets Flow Matching for Generating Protein Ensembles☆547Mar 22, 2026Updated 6 months ago
- Fast protein backbone generation with SE(3) flow matching.☆329Jul 19, 2024Updated 2 years ago
- ☆64Sep 14, 2023Updated 3 years ago
- A generative model for programmable protein design☆834Apr 11, 2024Updated 2 years ago
- Structure-conditioned masked language modeling for protein sequence design☆75Jan 31, 2024Updated 2 years ago
- Protein structure diffusion model for unconditional protein generation and motif scaffolding☆195Jun 24, 2024Updated 2 years ago
- FoldFlow: SE(3)-Stochastic Flow Matching for Protein Backbone Generation☆299Dec 10, 2024Updated last year
- ☆235Mar 2, 2024Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Official repository for DiffPepBuilder and DiffPepDock tools☆134Oct 24, 2025Updated 11 months ago
- ☆258Sep 22, 2026Updated 2 weeks ago
- Proteina is a new large-scale flow-based protein backbone generator that utilizes hierarchical fold class labels for conditioning and rel…☆277Jul 24, 2025Updated last year
- Updated Protpardelle models with more robust motif scaffolding and multichain support☆87Oct 2, 2026Updated last week
- Making Protein Design accessible to all via Google Colab!☆946Aug 28, 2026Updated last month
- ☆214Apr 21, 2025Updated last year
- GNN trained to predict changes in thermodynamic stability for protein point mutants☆276Sep 9, 2026Updated last month
- ☆103Jul 24, 2026Updated 2 months ago
- Generation of protein sequences and evolutionary alignments via discrete diffusion models☆686Jan 15, 2026Updated 8 months ago
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- ☆643Feb 6, 2025Updated last year
- User friendly and accurate binder design pipeline☆1,241Sep 21, 2026Updated 2 weeks ago
- Joint Sequence-Structure Generation of Nucleic Acid and Protein Complexes with SE(3)-Discrete Diffusion☆59May 6, 2024Updated 2 years ago
- Aligning protein generative models with experimental fitness☆152Mar 12, 2026Updated 6 months ago
- De Novo Protein Design by Equivariantly Diffusing Oriented Residue Clouds☆190Apr 21, 2024Updated 2 years ago
- ☆118Jan 3, 2026Updated 9 months ago
- Metrics to evaluate distributional coverage of generative models of protein structures.☆21Aug 13, 2025Updated last year
- PLACER is graph neural network for local prediction of protein-ligand conformational ensembles.☆268Nov 5, 2025Updated 11 months ago
- A generalized computational framework for biomolecular modeling.☆450Updated this week
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- ☆157May 18, 2026Updated 4 months ago
- Generating and scoring novel enzyme sequences with a variety of models and metrics☆72Feb 21, 2026Updated 7 months ago
- Official code repository for the paper "ProteinNPT: Improving Protein Property Prediction and Design with Non-Parametric Transformers"☆136Nov 19, 2025Updated 10 months ago
- ☆150Jul 16, 2025Updated last year
- ☆825May 18, 2026Updated 4 months ago
- ☆74Feb 13, 2026Updated 7 months ago
- Full-Atom Peptide Design based on Multi-modal Flow Matching (ICML 2024)☆113May 25, 2025Updated last year