Diffusion-based all-atom protein generative model.
☆236Aug 27, 2025Updated 8 months ago
Alternatives and similar repositories for protpardelle
Users that are interested in protpardelle are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆138Jun 3, 2025Updated 11 months ago
- Implementation for SE(3) diffusion model with application to protein backbone generation☆419Jul 3, 2023Updated 2 years ago
- Public RFDiffusionAA repo☆481Jul 9, 2024Updated last year
- Pytorch implementation for ICML 2024 paper Proteus: Exploring Protein Structure Generation for Enhanced Designability and Efficiency.☆90Jun 23, 2024Updated last year
- Sidechain conditioning and modeling for full-atom protein sequence design☆138Nov 11, 2025Updated 6 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Joint sequence and structure generation with RoseTTAFold sequence space diffusion☆334Oct 28, 2024Updated last year
- AlphaFold Meets Flow Matching for Generating Protein Ensembles☆526Mar 22, 2026Updated last month
- Fast protein backbone generation with SE(3) flow matching.☆328Jul 19, 2024Updated last year
- Structure-conditioned masked language modeling for protein sequence design☆74Jan 31, 2024Updated 2 years ago
- ☆65Sep 14, 2023Updated 2 years ago
- A generative model for programmable protein design☆818Apr 11, 2024Updated 2 years ago
- Protein structure diffusion model for unconditional protein generation and motif scaffolding☆192Jun 24, 2024Updated last year
- FoldFlow: SE(3)-Stochastic Flow Matching for Protein Backbone Generation☆286Dec 10, 2024Updated last year
- ☆224Mar 2, 2024Updated 2 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- GNN trained to predict changes in thermodynamic stability for protein point mutants☆251Mar 26, 2026Updated last month
- Official repository for DiffPepBuilder and DiffPepDock tools☆126Oct 24, 2025Updated 6 months ago
- Proteina is a new large-scale flow-based protein backbone generator that utilizes hierarchical fold class labels for conditioning and rel…☆256Jul 24, 2025Updated 9 months ago
- Making Protein Design accessible to all via Google Colab!☆914Apr 6, 2026Updated last month
- ☆212Apr 21, 2025Updated last year
- ☆578Feb 6, 2025Updated last year
- ☆98Oct 14, 2025Updated 7 months ago
- Generation of protein sequences and evolutionary alignments via discrete diffusion models☆669Jan 15, 2026Updated 4 months ago
- The Family of Diffusion Protein Language Models (DPLM)☆330Jul 25, 2025Updated 9 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- User friendly and accurate binder design pipeline☆1,096May 11, 2026Updated last week
- Joint Sequence-Structure Generation of Nucleic Acid and Protein Complexes with SE(3)-Discrete Diffusion☆60May 6, 2024Updated 2 years ago
- Aligning protein generative models with experimental fitness☆121Mar 12, 2026Updated 2 months ago
- ☆118Jan 3, 2026Updated 4 months ago
- De Novo Protein Design by Equivariantly Diffusing Oriented Residue Clouds☆188Apr 21, 2024Updated 2 years ago
- Toward High-Accuracy Open-Source Biomolecular Structure Prediction.☆1,889May 6, 2026Updated 2 weeks ago
- Generating and scoring novel enzyme sequences with a variety of models and metrics☆71Feb 21, 2026Updated 2 months ago
- Official code repository for the paper "ProteinNPT: Improving Protein Property Prediction and Design with Non-Parametric Transformers"☆130Nov 19, 2025Updated 6 months ago
- ☆805May 6, 2026Updated 2 weeks ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆149Jul 16, 2025Updated 10 months ago
- ☆74Feb 13, 2026Updated 3 months ago
- Versatile computational pipeline for processing protein structure data for deep learning applications.☆278Feb 14, 2024Updated 2 years ago
- Full-Atom Peptide Design based on Multi-modal Flow Matching (ICML 2024)☆105May 25, 2025Updated 11 months ago
- Adapting protein language models for structure-conditioned design☆42Aug 5, 2024Updated last year
- Code for the ProteinMPNN paper☆1,725Aug 14, 2024Updated last year
- ☆47Sep 16, 2024Updated last year