ProteinDesignLab / protpardelle
Diffusion-based all-atom protein generative model.
☆167Updated last week
Related projects ⓘ
Alternatives and complementary repositories for protpardelle
- Protein structure diffusion model for unconditional protein generation and motif scaffolding☆124Updated 4 months ago
- GNN trained to predict changes in thermodynamic stability for protein point mutants☆125Updated 2 months ago
- Protein-ligand structure prediction☆205Updated 3 months ago
- ☆233Updated 5 months ago
- A compilation of deep learning methods for protein design☆94Updated 2 years ago
- repo for DynamicBind: Predicting ligand-specific protein-ligand complex structure with a deep equivariant generative model☆199Updated 6 months ago
- ☆94Updated last month
- Protein Ligand INteraction Dataset and Evaluation Resource☆165Updated this week
- ☆175Updated this week
- DockQ is a single continuous quality measure for Protein, Nucleic Acids and Small Molecule Docking Models☆224Updated 2 months ago
- PINDER: The Protein INteraction Dataset and Evaluation Resource☆92Updated this week
- PocketGen (Nature Machine Intelligence 24): Generating Full-Atom Ligand-Binding Protein Pockets☆103Updated this week
- De Novo Protein Design by Equivariantly Diffusing Oriented Residue Clouds☆167Updated 7 months ago
- In silico directed evolution of peptide binders with AlphaFold☆126Updated last month
- Implementation of DiffDock-PP: Rigid Protein-Protein Docking with Diffusion Models in PyTorch (ICLR 2023 - MLDD Workshop)☆194Updated 10 months ago
- ☆65Updated 3 weeks ago
- Masif seed paper repository☆137Updated last year
- A collection of tasks to probe the effectiveness of protein sequence representations in modeling aspects of protein design☆94Updated last month
- Dataset and package for working with protein-protein interactions in 3D☆84Updated 3 weeks ago
- ☆75Updated last month
- ☆118Updated last year
- Predict multiple protein conformations using sequence clustering and AlphaFold2.☆135Updated 2 months ago
- ☆105Updated last year
- Protein hallucination and inpainting with RoseTTAFold☆245Updated last year
- Predict the structure of immune receptor proteins☆120Updated 4 months ago
- Joint sequence and structure generation with RoseTTAFold sequence space diffusion☆265Updated 3 weeks ago
- ☆66Updated last year
- ☆96Updated 3 weeks ago
- ☆159Updated last month
- Plausibility checks for generated molecule poses.☆224Updated 3 months ago